Pseudoalteromonas sp. Xi13: EJ103_06230
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Entry
EJ103_06230 CDS
T10490
Name
(GenBank) PAS domain S-box protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxsi03000
]
EJ103_06230
Transcription factors [BR:
pxsi03000
]
Prokaryotic type
Helix-turn-helix
Other families
EJ103_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS
PAS_9
AAA_5
PAS_4
Mg_chelatase
AAA
HTH_8
MCM
PAS_3
AAA_3
AAA_2
TIP49
AAA_16
PAS_7
PAS_8
AAA_7
AAA_19
AAA_22
bpMoxR
SpoVT_C
nSTAND3
DUF7259
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
AZN32336
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Position
1:1370405..1371823
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AA seq
472 aa
AA seq
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MIKQFLNDPKLLLNAVGEGIYGFDLSGNAVFVNPAAERMTGWKAQELLGKKIHQYHHHSH
ADGSPYPADECQIYCTMFDGKRREVKNEVFWRKDGTSFAVEYTSTPVYRQGELIGAVAVF
RDISAQQQTQNELKQALEQVKHLSEQLQDENNYLIAELNEDWQDSGLVGQSHVFQAMLAQ
IKLVSETDSTVLILGENGTGKELVARNLHRLSKRSNQAFIKVNCAAFTPSLLESELFGHE
RGAFTGANERRKGRFELADKGTLFLDEVAELPLEAQSKLLRVLQEQEFERVGGSTTLKVN
IRVLAATNRDLWQMVQKGTFRIDLYYRLNVFPIKVPALKERKEDIPYLCTNLITQLNKRL
AKQIKGVSKKAISQLQAYDWPGNIRELQNVLEREAILTKHTVLKLSQPLHGDASTTVNTS
LTLAEAQKQHIIAVLELSQWQISGDKGAACKLGLPESTLRSKMRKLGISKNT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaatttttaaatgaccccaaacttttacttaatgcagtaggagagggcatt
tacggctttgatttatcgggcaatgcggtgtttgttaatccagccgctgaacgaatgaca
ggctggaaagcccaagaattgttgggcaaaaaaatacaccagtatcatcatcacagccac
gccgacggctctccttatccagccgatgaatgccaaatatattgcaccatgtttgatggc
aaacgccgcgaggttaaaaacgaagtattttggcgcaaagacggcacctcgtttgcagta
gaatacacatcaacccccgtttacaggcaaggtgagttaattggtgcggtcgcggtattt
cgcgatatatcggcgcagcagcaaacccaaaacgaacttaagcaagcgcttgagcaagtt
aagcatttaagtgagcagcttcaagatgaaaataactacctaattgcagagcttaacgaa
gactggcaagactcaggtttagttggccaaagccatgtttttcaagctatgttggcgcaa
attaaactcgttagcgaaaccgacagcacagtattaattttaggtgaaaatggaacaggc
aaagagctggtggcgcgtaacttacaccggttaagtaaacgcagtaatcaagcttttata
aaagtgaactgcgcagcgtttacgccaagcttgttagagtctgaattatttggccacgag
cgcggtgcgtttaccggtgcaaacgagcgacgtaaaggccgctttgaactggccgacaaa
ggcacactgtttttagacgaagttgctgagctgccattagaagcgcaaagtaaattgcta
cgggtattacaagagcaagagtttgaacgggttggcggtagtactacgcttaaggtaaat
attagagtattggcagcaaccaatcgcgatttatggcaaatggtgcaaaaaggcaccttt
cgaattgatttatattaccgccttaatgtgtttcctattaaagtgcctgcgcttaaagag
cgcaaagaagacattccttatttatgcaccaatttaattactcaactaaataaacgctta
gcaaagcaaataaaaggggtgagtaaaaaagcgattagccaactacaagcttatgattgg
cctggtaatattcgcgagttacaaaacgtactagagcgcgaagctattttaactaaacat
actgtccttaaactgagtcagccattgcatggcgatgcaagcacaactgtaaatacatca
cttacgcttgcagaggcgcaaaaacagcacattattgcggtgcttgaattgtcacagtgg
caaatatctggcgataaaggcgctgcttgcaaattaggcctgcccgagagcactttgcgc
tcaaaaatgcgcaaactaggaataagcaaaaatacgtga
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