Pseudoalteromonas sp. Xi13: EJ103_06465
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Entry
EJ103_06465 CDS
T10490
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJ103_06465 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_06465 (recC)
Enzymes [BR:
pxsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJ103_06465 (recC)
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJ103_06465 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AZN32372
LinkDB
All DBs
Position
1:1414906..1418208
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AA seq
1100 aa
AA seq
DB search
MLNIIQSNRMEALQAQFNQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGLAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPSCIDEPLYLPLKTYLEGDLD
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGKDELDDVDVSIAPWQSDLWRKLVAHSKA
LGQSQFHRANMQGQLLGALENMDNSLLPKRISLFGISAIASSQLEVFEALSKKTEVFLFF
FNPSEHYWGDVVDEKAAAKINAKYAKMPLLEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDAFDDSLLGQIQSEIYQLAFKGESLTDNKQWFINDEGKLPIS
DTDTSITLSDCHTPLREVERLHDYLLTLFNQNPSLTPKDIIVMMPDVGTYSPYIEAVFGG
AQNTSRFIPYALADLAIEQEKPVLSSFASLASLPFSRFGVSDILDLLQVTQIAEKFALEA
HEYEQIQYWLERVGVKWGINAEHKSSFDLPAIDLNTWQHGLNRLLLGIAQRDEQCPFNGI
YSADEVEGMALDTLNKLVHFIDVLQRFKDELTPDDTLSNKADILSELINAIYYNEGEDSW
DLLVLQNVLEELKKHHDNGDYDKHVSQRIVSYLIKQGIQEKGVGQRFLVGQVNFCTLMPM
RAVPFKVVCMLGLNDADYPRTVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSAREN
LYISYIGRSCFDNQPRMPSTLVSELLEYIGRSFTLANNSEKTLPECLINQQHLQPFNRAY
YTADTEADEKLSNHSFNPIWLPSERIDAQPLTAIDVTAPAQLELDVFIRSVCNAQESFYQ
QTLGLRLPEFNEVAKDEEPFSLDALRRYFYLDEILQANINEQPLSTEQILQRGELPQANV
GNLVYESMAHRVDALSGQVKEHIKSGKTDPLEVSLRIENTTIEGWLNHIYLQKQVFYRSA
SIKAKDLIKGFIYHIVAQSMEQNVETLLLGLDKQISFAPLSKNEADALLNDWFSLYQALR
KEPVAFYPVSGYEYVKSGGDIGKAISKFNPQYIGRGEGENPYIRLTVQSLNDCQEEFIKW
SEKLLSPLHAHAKESDHASA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattattcaatcaaaccgtatggaagcgctgcaggctcagtttaatcagctg
ttaaaagtaaacccgctgcaaagcccattcgataaagaagtggtattagtgcagtcgccg
ggtatgtcgcagtggcttaaaattggtttaagcgaaaacctagggttagccgcgcaggtc
gattttccgctgccatcgagctttatatggcagttgtatcagcagttactgcccaatgta
cctaaagagtcggcatttaataagcctaaccttgcttggaaattatttgcaatactgccc
agctgtattgatgaaccgctttatttgcccttaaaaacctatttagagggcgacctagac
gggcaaaaaacctttgccctgtgtgaaaaaattgccgatgtgtacgaccaatatttaatg
taccgcccgcattggattgccacttgggatagcggcaaagatgaacttgacgatgttgat
gtaagcattgccccgtggcaaagcgatttatggcgaaagctggtggcgcacagtaaagcg
cttggacaaagccaatttcatcgtgccaatatgcaagggcagctactcggtgcccttgag
aatatggataatagcttactacctaagcgcattagtttatttggtatatcggcgattgcg
agctcgcagcttgaggtgtttgaagcgctgagcaaaaaaacagaggtgtttttattcttt
tttaatcctagcgagcattattggggcgatgtggttgatgaaaaagcagcagccaaaata
aatgccaaatacgccaaaatgccgcttttagaagcgcagcaaaaaaaacaaactaaccct
gatgaagagtactactttataggtaacccgcttttatcgtcatggggaaaactagggcgc
gactactttgagcaacttgtacaacttgatgcgcgttggattgatggctttatagatgcg
tttgacgatagcttactgggccaaattcaaagcgagatttaccaacttgcatttaaaggt
gagtcgcttaccgataataagcagtggtttattaatgatgagggtaaactgcccattagc
gacaccgacaccagcattactttaagcgattgccacacaccgcttagagaagtagagcgc
ttgcacgattacttacttactttgtttaatcaaaacccgtcgctcactcctaaagacatt
attgtaatgatgcctgatgtaggtacgtacagcccgtatattgaagcggtatttggcggc
gcgcaaaacaccagtcgctttattccttatgcattggccgatttagccatagagcaagaa
aaaccggtgctgagctcgtttgccagcttagccagtttgccgttttcgcgttttggtgtc
tcggatattcttgatttactgcaagtaacacaaattgccgaaaaatttgcgctagaggcg
cacgagtacgaacaaattcaatattggcttgagcgtgtaggggttaaatggggtataaat
gctgagcataaaagcagctttgatttacccgcaatagatttaaatacctggcagcatggt
ttaaaccgtttactgctaggcatagcccagcgcgatgagcaatgcccgtttaacggcatt
tacagtgccgatgaagtagagggcatggcgcttgatacccttaataaactggtgcatttt
attgatgtactgcagcgctttaaagatgagctaacccctgatgatacccttagcaataaa
gcggatattttatctgagctaataaatgctatttattacaatgagggcgaagacagctgg
gatttactggtactgcaaaatgttttagaggagcttaaaaagcaccacgataatggcgat
tacgataaacatgtatcgcaacgaattgtaagctacctgataaaacaaggcattcaggaa
aaaggggtaggacagcgctttttagtggggcaagttaacttttgtacactaatgcctatg
cgcgccgtgccgtttaaagtggtgtgtatgcttggtttaaacgatgccgattacccacgt
acggtgcagccaatagggtttgacttagtgccgtattctaaaaaacaaaaaggtgaccga
tcacgtaaattagatgaccgctacttatttttagaagccctcctgagtgcccgcgaaaat
ttatacataagttacattggccgctcgtgttttgacaatcaaccgcgtatgccctcaacc
ttagtaagcgagcttttagagtacataggccgcagctttacgttagcaaataacagcgaa
aaaacgctgcctgagtgtttaattaatcagcagcacttacagccttttaatcgtgcgtat
tacacagcagacactgaagctgatgaaaagctgagtaatcacagttttaatcctatttgg
ctaccaagcgagcgtatagacgcgcagccgctaacagccattgatgtaacagcgcccgcg
caattagagcttgatgtatttattcgcagtgtgtgcaacgcacaagagagcttttaccag
caaacattaggtttacgccttcctgaatttaacgaagtagcaaaagatgaagagcctttt
agcctagatgcgctgcgccgctacttttatttagacgaaatactgcaagccaacattaat
gagcaacctttaagtacagagcaaatattgcaacggggagagctgccacaagccaatgtg
ggcaatttagtgtatgagagcatggcgcaccgagtagatgcactatccgggcaagtaaaa
gagcatattaaaagcggcaaaaccgacccgcttgaggtgtctttgcgcatagaaaacacc
actattgagggctggcttaatcatatttaccttcaaaaacaagtgttttaccgaagtgcc
agtataaaggccaaagatttaattaaaggctttatatatcatattgttgcacaaagtatg
gagcaaaatgttgaaacccttttactggggctcgataagcaaattagctttgcaccactg
agtaaaaatgaggccgatgccttactcaatgattggttttcgttataccaagccttgcgc
aaagagcctgtggcattttatccggtaagtggctatgaatacgttaaaagtggtggcgat
attggtaaagccattagcaagtttaacccacaatacatagggcgcggcgagggcgaaaac
ccgtatattcgtttaacggtgcaatcgctcaatgactgccaagaagaatttattaagtgg
agcgaaaaattactctccccattacatgcacatgcaaaggagagtgaccatgcaagcgct
taa
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