Pseudoalteromonas sp. Xi13: EJ103_07860
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Entry
EJ103_07860 CDS
T10490
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxsi03032
]
EJ103_07860 (ihfB)
03036 Chromosome and associated proteins [BR:
pxsi03036
]
EJ103_07860 (ihfB)
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_07860 (ihfB)
DNA replication proteins [BR:
pxsi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EJ103_07860 (ihfB)
Chromosome and associated proteins [BR:
pxsi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EJ103_07860 (ihfB)
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EJ103_07860 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
PqqD
VWA_3
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
AZN32643
LinkDB
All DBs
Position
1:1745139..1745426
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AA seq
95 aa
AA seq
DB search
MTKSELIETLAEQHAHVPVKDVENAVKEILEQMAGSLSTSDRIEIRGFGSFSLHYRAPRT
GRNPKTGDTVELDGKHVPHFKPGKELRDRVNESIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcagaactgatagaaacacttgccgaacagcacgcacacgttccagtgaaa
gatgttgaaaatgcagtaaaagaaattcttgaacaaatggccggctcattatctacttcc
gatcgtattgagatcagaggttttggtagtttctctttgcattaccgcgctcctcgcaca
ggtcgtaatcctaagactggcgatacagtagagcttgatggtaagcatgtacctcatttt
aaaccaggcaaagaattacgcgaccgcgtaaacgagagtattgcctag
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