Pseudoalteromonas sp. Xi13: EJ103_12790
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Entry
EJ103_12790 CDS
T10490
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_12790 (radA)
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EJ103_12790 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_22
Lon_C
SLFN-g3_helicase
AAA
nSTAND3
AAA_16
ABC_tran
AAA_14
AAA_18
NPHP3_N
cobW
Rad51
AAA_30
AAA_19
ATPase_2
AAA_11
AAA_24
NACHT
TsaE
VapE-like_dom
Thymidylate_kin
CobU
NTPase_1
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AZN33542
LinkDB
All DBs
Position
1:complement(2845239..2846624)
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AA seq
461 aa
AA seq
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MAKAAKVEFVCTECGMNYQRWQGQCRCGAWNTLAEFKPSAGQSKKAAARATVGGYAGGIG
GGSKKIDDVATTEAEKQLTEIGELDRVLSGGVTTGSVNIISGDPGAGKTTLLSDLVARMS
QRMPSLYCTAEESLSQFKNRVNRLKLNYNADELYLLSETSVETIIEELDKNKIKFAVIDS
IQAVVTDTANGSPGSPSQVKSAAQALTQYCKQNDVTMFIIAHVNKNNEIAGPQTLVHIVD
ALLHIDTNDGQVRTLRANKNRFGDIDTVGIFKMCERGMLSVDNPSEIFLSGSSTESPGST
ITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFF
NIVGGLRIDETETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE
AAQHGFTEIFIPFRNYHKSMEGLGAKITPVKTVHELLSLIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcggcaaaagtagaatttgtttgtacagagtgtggtatgaactatcaacgt
tggcaaggtcagtgtcgctgtggtgcgtggaacacgttggcagaatttaaaccctctgca
gggcaaagtaaaaaagccgctgcgcgagcaaccgttggtggttatgcaggtggcattggt
ggcggctctaaaaaaattgatgatgtagccaccaccgaggccgaaaagcagctaacagaa
ataggcgagcttgaccgtgtactaagcggcggcgtaaccacgggctcggttaatattata
tcgggcgacccaggggcaggtaaaacaacgctattatctgatttagtagccagaatgtcg
cagcgtatgccatcactttactgtactgctgaggagtcgttgtcgcagtttaaaaaccgt
gtaaaccgcttaaagcttaactataacgccgatgagctttatttactttctgaaactagc
gtagaaaccattattgaagagcttgataaaaataaaattaagtttgctgttatcgactct
attcaggcggttgtaaccgacactgcaaatggcagccctggttcgccttcgcaagtaaaa
agtgccgcgcaagcgcttactcagtattgtaagcaaaacgatgtcactatgtttattatt
gcccatgtaaataaaaacaacgaaattgcagggccgcaaacattagtgcatatagtggat
gccttattgcacattgacacgaatgatggacaggtacgtacgcttagagctaacaaaaac
cgttttggtgatattgataccgtaggcatttttaaaatgtgcgaacgcggtatgctgagt
gttgataaccccagcgagatttttttatcgggatcaagtactgaatcaccaggctctact
attacgtgtatccgaaaaggtaaccgtaatttattgctcgaaattcaatgtttaaccacc
gaaaccgaagccgaatttccgcagcgtgtgtgcgtgggtttaaacatgaaccgaataaaa
atgctcactggtattttacgcaaacacaccaaaactaaaatatttcacgatacgtttttt
aatattgtgggcggcttacgaatcgatgaaaccgaaacctgtattgatttagcgttagta
accgcgcttttaagcagcttaaacgagtttgttgtaccgcgtacaacctgcatcatgggt
gagcttagtttaaacggcgatgttcgcccaatcgacagcggtgtaccacgggttaaagaa
gcggctcagcatgggtttactgaaatatttattccgtttcgtaattaccataaatcgatg
gaaggactaggggctaaaattacgccagtaaaaaccgtgcacgagttactgagtttaatt
aattaa
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