Pseudoalteromonas sp. Xi13: EJ103_16980
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Entry
EJ103_16980 CDS
T10490
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxsi03032
]
EJ103_16980
03036 Chromosome and associated proteins [BR:
pxsi03036
]
EJ103_16980
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_16980
DNA replication proteins [BR:
pxsi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EJ103_16980
Chromosome and associated proteins [BR:
pxsi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EJ103_16980
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EJ103_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
UBA_HYPK
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AZN34409
LinkDB
All DBs
Position
2:complement(108502..108777)
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AA seq
91 aa
AA seq
DB search
MNKAQLVEKIATDAEISKAAATRALDAFTGAVTSSLKEGNSVALVGFGTFSVKERAARTG
RNPQTGAEIQIAAATIPSFKAGKGLKDQVNP
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcaattagttgaaaaaatcgctactgatgcagaaatctctaaagctgct
gctacacgtgcacttgacgcgtttactggcgctgtaacttcttctttaaaagaaggtaat
tcagttgcattagtaggttttggtactttctcagttaaagaacgtgcagcacgtactggc
cgtaacccacaaacgggtgctgagatccaaatcgcagcggcaactatcccaagctttaaa
gcaggtaaaggtcttaaagaccaagtaaacccttaa
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