KEGG   Pseudoalteromonas sp. Xi13: EJ103_19015
Entry
EJ103_19015       CDS       T10490                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pxsi  Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:pxsi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pxsi02044]
    EJ103_19015 (tssC)
Secretion system [BR:pxsi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EJ103_19015 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 Imm6 Flavi_glycoprot
Other DBs
NCBI-ProteinID: AZN34785
LinkDB
Position
2:complement(573508..574998)
AA seq 496 aa
MSAEQLSTELESTAEASSSLLEQAIGATKQTDASRAEELLKTLTEEALKGTVQWNKNMTV
TFNEAIQLIDQKISKQLSVVMHSEEFQKLEGSWRGLHHLVMNSETSSTLKIRVLNMKKKE
LHKDLSKAVEFDQSQTFKKIYESEFGTPGGEPYGTIVGDFEFTNHPEDVETLSLMSNVAA
AGFCPFIAASSPSLFGFDNWEELTKPRDLEKVFESLEYTKWRSFRDSDDSRFVSLTMPRF
LSRLPYGAASKPVEEFNYEEFEVEPKAGRSVSTDNSDYCWSNAAYAMATNMTKAFSQYGF
CTAIRGAEGGGKVEGLPTHIFTSDDGDPDLKCPTEIGITDRREAELSKLGFLPLCHYKNT
DYAVFFGGQSCQKPQIYSTPDATANAAISARLPYLMATSRFAHYLKVMARDKIGSFMEAE
DVESWLNRWILSYVNATEGGGQDIRARYPLADAKVSVKEIPGQPGAYNAVAWLRPWLQME
ELTSSLRLVAKIPEIG
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgagtgcagagcaactaagtactgaattagagtcaacagctgaggcaagctcatcgtta
ttagagcaagccattggtgccactaagcaaactgatgcaagtcgtgcagaagaactactt
aaaacattaactgaagaggcattaaaaggcacagttcaatggaataaaaacatgactgtg
acgtttaatgaagcaattcaattaatcgatcagaaaatctcaaagcagcttagtgttgtt
atgcacagcgaagagtttcaaaagttagaaggttcttggcgtggtttgcaccaccttgta
atgaattctgaaacgagctcaacgcttaaaattcgtgttttaaacatgaagaaaaaagaa
ctacataaagatttaagcaaagcagttgagtttgaccaaagccaaacatttaaaaagatt
tacgagtctgaatttggtactcctggtggcgaaccttatggcacaattgtgggtgacttt
gaatttactaatcacccagaagatgtggaaacgttaagcctaatgtcgaatgtggcagca
gctggtttctgtccatttattgccgcttcttcaccgtctttattcgggtttgataactgg
gaagagttgactaaacctcgtgatttagaaaaagtgtttgaatcattagagtacacaaaa
tggcgctcgttcagagacagcgatgattcacgttttgtatcgctaactatgcctcgcttc
ttatcacgtttaccttacggtgcagcttctaaacctgtagaagagtttaactatgaagag
tttgaagttgaaccaaaagcaggccgttcagtaagcactgataatagcgactactgctgg
agtaatgcagcttacgcaatggccactaatatgaccaaagcgttttcgcaatacggtttt
tgtactgcgatacgtggtgctgaaggtggcggtaaagttgaaggcttaccaacgcatatt
ttcacaagtgatgatggcgatccggatcttaaatgcccaacagaaattggcataacagac
cgtcgtgaagctgagctaagtaaacttggtttcttacctctgtgtcattacaaaaatacc
gattacgctgttttctttggtggccaaagctgtcaaaaaccacaaatatattcaacgcct
gatgcaacagctaatgctgcaatttcagctcgcttaccttacttaatggcgacgtctcgt
tttgcacattatttaaaagtgatggcgcgcgataaaattggtagctttatggaagcggaa
gatgttgagtcatggttaaaccgctggattctatcgtatgtaaatgcgaccgagggtggt
ggccaagatatcagagcacgttacccattagccgatgcaaaagtatcagttaaagaaata
ccaggtcagccaggcgcctataacgcagtggcatggttacgaccttggctacaaatggaa
gagcttacctcttcattacgtcttgtagctaaaattccagagattggttaa

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