Papilio xuthus (Asian swallowtail): 106113813
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Entry
106113813 CDS
T07456
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03008
Ribosome biogenesis in eukaryotes
pxu03013
Nucleocytoplasmic transport
pxu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106113813
03015 mRNA surveillance pathway
106113813
03008 Ribosome biogenesis in eukaryotes
106113813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106113813
03009 Ribosome biogenesis [BR:
pxu03009
]
106113813
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106113813
mRNA cycle factors
Stress granule specific factors
106113813
Ribosome biogenesis [BR:
pxu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
106113813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
DUF5992
DUF3676
Motif
Other DBs
NCBI-GeneID:
106113813
NCBI-ProteinID:
XP_013162261
UniProt:
A0AAJ6YZS6
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MPKRGGGRIKNWKTDNDHFEHDDRTHNPRRVSFKPGTNKGKNKFNNWNKNAKLLLDDDVD
MGMSGGQGPRKPFRGRGGRLGSPAPRPRHAGKKFTPGMLPWYQIVIPYGAKHEKDVILRA
LLNFTSPDIFIPHYYRINGNAAIFYVDDVKSAENLFNADKKIVMPDGFKMVVIVKNAVPN
VNVDANMKEKMKLVMAKRYNPATKALDMTKFHSDSDLSEIFCGLFRPVIMLTAIDIIAEN
IPDIEALNLNDNKLHGLDHLKVMATKLKNLKILYLGDNRIPVVGSLESLRNLPLVELMLK
GNPLRNRFNDHDDYVSTVRKKFPKLVRLDGVDLPPAIGFDVAEDVALPAQQQSFLIEPAA
QDFVRQFLAQYFAVYDSESRQSLMDAYHENATMSMTTSYLTHDIRNSPSTKLHQYLPNSR
NILRITDRESRRRYLRTGKLQVVAFICDLPKTTHDLMGFAVDVLIYTPTMIMVSMNGVFK
ETASQGSRSFHRTFMIVPNNGGGFCIVNDMLFITNTTKEQEEKMFQSGVPAAAPAPVAAT
TPAPAPAPAPAPAASEALHSEHHRMLLNALGQQTGMNDYWSMNCLQETGWDLQKAMFIFN
KLQSEGKIPHEAFVK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtggtggaggacgtataaaaaattggaaaactgataatgatcattttgaa
cacgatgatcgaacacataacccaagacgcgtgagcttcaaaccaggtacaaataaaggc
aagaacaaatttaataactggaacaaaaatgccaagttattacttgatgacgacgttgat
atgggcatgtccggaggacaaggacctaggaaaccatttagaggtcgcggagggcgactc
ggttctccggcgcctagacctagacatgctggcaagaagtttactcctggcatgctaccc
tggtatcagatagttattccttatggagcaaaacatgagaaagatgtcatattacgagcg
cttcttaatttcacatcgccagatattttcattccacattattatagaattaatggcaat
gctgccatcttctatgtggatgatgttaagtcagccgagaatttgtttaatgcggataaa
aagattgtaatgccagatggttttaaaatggttgtgatagtgaagaatgctgtcccaaat
gttaatgtggatgccaatatgaaagaaaaaatgaagttagttatggctaaaagatacaat
ccagctacgaaagcattggacatgacaaaatttcattctgattctgatttatcagaaatc
ttctgtggcctttttcggccagtcatcatgctaacggcaatagatatcatagcagaaaac
ataccagacattgaagccttgaatctcaatgataacaaattacatggactggaccatctc
aaagttatggctacaaaattgaaaaacttgaagattttatatttaggcgataacaggata
cctgttgttgggtcactggagtcgttaagaaacttacccctcgtggagttgatgctcaaa
ggcaacccgttgcggaacaggtttaatgatcatgatgattacgtcagcactgtgcggaag
aagttccctaagcttgtacgactggatggtgtggacttgccgcctgcaattggtttcgac
gtggccgaagatgtagcactgcccgctcagcaacagtcattcctcatagagccagcggca
caggactttgtgaggcagttcttagctcagtacttcgccgtgtatgattctgaatctaga
cagtcattaatggacgcctatcatgaaaatgcaacaatgtctatgactacatcttacctc
acccatgatataagaaattctccgtctaccaaattacatcagtacctgccaaacagtcgg
aacatattaaggatcactgatagagagtcaagacgaagatatcttcgtacaggcaagcta
caggtggttgccttcatctgtgacctcccgaagacaacacatgatctaatgggcttcgct
gttgatgtacttatatatacaccaacaatgataatggtgtcgatgaatggagttttcaaa
gagacagcaagtcaaggcagtcgctcgtttcatcgcacttttatgatagtacccaacaat
ggtggtggtttctgcatagttaatgatatgttattcatcaccaatactactaaggaacag
gaagagaaaatgttccaatccggtgtgcctgcggctgcgcctgcaccggtggctgcaacc
acacctgccccggccccagcgccagccccggctccagctgcgtccgaggccctacacagt
gaacatcacaggatgctgctcaatgccctcggccagcagaccggcatgaacgattattgg
agtatgaactgccttcaagagaccggttgggatctccaaaaggcaatgttcatcttcaac
aaacttcaatctgagggtaaaataccacatgaagcctttgttaagtga
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