Papilio xuthus (Asian swallowtail): 106114631
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Entry
106114631 CDS
T07456
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03018
RNA degradation
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106114631
09123 Folding, sorting and degradation
03018 RNA degradation
106114631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106114631
03041 Spliceosome [BR:
pxu03041
]
106114631
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106114631
mRNA degradation factors
5'-3' decay
Lsm complex
106114631
Spliceosome [BR:
pxu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106114631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Svs_4_5_6
Motif
Other DBs
NCBI-GeneID:
106114631
NCBI-ProteinID:
XP_013163363
UniProt:
A0A0N1I660
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEESQIKARGRNEVSKGRGGQNMRSGRGGGRGAFGNRGRPA
PLSRGGGNTGRNPPNKNKK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgctgccattatcgttattaagaacagcacagaaccatccaatgttagtcgaattgaag
aatggtgaaacttacaacggccacctcgttagttgcgataactggatgaatataaactta
cgagaagtaatttgcacatcaagagacggtgacaagttctggaggatgcctgaatgttac
attcgtggtagtacaataaaataccttcggatacctgacgaggttatagatatggttaaa
gaagaatcgcaaatcaaagctcgtggtcgtaacgaagtatctaaaggtcgcggtggtcag
aacatgagatctggacgcggaggcggtcgtggtgcgttcggaaaccgcggcagacctgca
ccgttgtcgagaggtggcgggaacactggtagaaatccaccaaacaaaaataagaagtaa
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