Papilio xuthus (Asian swallowtail): 106116024
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Entry
106116024 CDS
T07456
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03030
DNA replication
pxu03420
Nucleotide excision repair
pxu03430
Mismatch repair
pxu03440
Homologous recombination
pxu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106116024
03420 Nucleotide excision repair
106116024
03430 Mismatch repair
106116024
03440 Homologous recombination
106116024
03460 Fanconi anemia pathway
106116024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxu03000
]
106116024
03032 DNA replication proteins [BR:
pxu03032
]
106116024
03400 DNA repair and recombination proteins [BR:
pxu03400
]
106116024
Transcription factors [BR:
pxu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106116024
DNA replication proteins [BR:
pxu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106116024
DNA repair and recombination proteins [BR:
pxu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106116024
MMR (mismatch excision repair)
106116024
DSBR (double strand breaks repair)
HR (homologous recombination)
106116024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
IBR
Motif
Other DBs
NCBI-GeneID:
106116024
NCBI-ProteinID:
XP_013165183
UniProt:
A0AAJ7E6Q7
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MSYKLSEGALEVIMNGGHYDKPVMQILGNKKIQGSGANERFRLLVSDGKHSLSFAMLATQ
LNDKLKTGELSDYSVVQVDRFITSVIKPNAEKRVMILLEITILAPGSEVGKKLGNPQTWS
EDSAQAPVPATMTPAPKANPRPPPAVKPTFNPQLDSSMLSSQMTHPIASLSPYQNKWVIK
ARVMNKSGIRTWSNARGEGKLFSMDLCDDSGEIRATAFKNECDKFYDMIEVDKVYYISRC
ILKAANKQFTSLKNDYEMTFTADTVVSECMEDASTVPSVKFDFVPISEIANKSPDSLLDM
IGVCKSAADVQELTAKSTGKLLKKREVTLVDSSGGAITLTLWGNEAEKFDGSTNPVIAAK
GARLTEFNGSKSLSCLSSTMVRLNPDLPETHRLRGWYDNGGADCDIVNISARSGAYGGGS
GEWVTFAEAEARQLGAGERGDYYSLLGALTFTFSDNAVYKACPQEQCNKKLLDQENGLYR
CEKCNREYPNYKYRLLLGANVSDPTGDQRVTAFNEAAESMLGKTAAEIGQMFEYDKAAYS
QLFEEVKFKTFVFKFRTKMETYSDEARLKTTVMSATPVDYKDANARLVKSIKALSGVEV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaaattatcagaaggggccctggaggtcataatgaatggcggtcattatgat
aaaccggtaatgcagatactcggcaataaaaagattcagggtagtggcgctaacgagaga
ttcagattactagtatcggatggcaaacattctttgagcttcgctatgctcgcgacacaa
ttgaacgacaaactgaaaaccggagaattgtcagactactcagttgttcaagtagaccgc
tttatcacttcagtaataaagcctaatgcagaaaagagggttatgatattgctagaaatc
acaatcttagcacctggatcagaagttggtaagaagctgggtaatcctcaaacatggtca
gaggactctgcacaagcgccagtaccagcaacaatgacaccagcacctaaagcaaaccca
aggccacctcccgcagtcaaacctactttcaacccacagctagactccagtatgctatca
tcacaaatgacacatccaatagcaagtcttagtccataccaaaataaatgggttataaaa
gctcgtgtgatgaacaagtcagggattcgcacatggagcaatgctcgtggtgaaggaaaa
ctgttcagtatggacttgtgcgatgacagtggagaaattagagctaccgcattcaaaaat
gaatgtgataaattttacgatatgattgaggttgataaagtatactacataagcagatgt
attctgaaggcggcaaacaaacaatttaccagtttgaagaatgattatgagatgacattc
accgcggatacggttgtctctgaatgtatggaggatgcatcaacggtcccctctgtgaag
tttgattttgttccgatcagtgaaatagccaacaagagtcctgattcattgctagatatg
attggagtatgtaagagtgcagctgatgtgcaagaattaacagctaaaagtacaggcaag
ttgctaaagaaacgcgaagtgacgcttgtcgactcatcaggtggtgcgattactcttaca
ttgtggggcaatgaagctgagaaatttgatggtagtacaaatccagtaattgctgctaag
ggtgctcgtctaacagagttcaacggcagcaaatccctctcctgtctctccagtactatg
gtacgcctcaaccctgacttgccggagacgcacagactgcgcggctggtacgacaacggc
ggtgctgactgcgacatagtcaatatctccgccaggagcggagcatacggtggcggcagc
ggggaatgggtgacgttcgcggaggcggaggcgcggcagctgggcgccggcgagcgcggg
gactactacagcctgctcggagcgctcacgttcaccttctctgacaacgcggtgtacaaa
gcctgtccacaggagcaatgcaacaagaaactgctggatcaagagaacggcttgtaccgc
tgcgagaagtgcaatcgagagtaccctaattataaataccggcttctgctaggcgcgaac
gtgtctgacccgacgggcgaccagcgcgtgactgcgttcaacgaggcagcagagagcatg
ctcggcaagacggcagctgagatcggacagatgttcgagtacgacaaggccgcatacagc
cagctcttcgaggaagtcaagtttaaaactttcgtattcaagttccgcaccaagatggag
acctacagtgatgaagctcgattaaaaaccacagtaatgagcgcgacgccagtagactac
aaagacgcgaacgcacgactcgttaaaagtatcaaagctttgagcggagtcgaagtgtga
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integrated database retrieval system
