KEGG   Papilio xuthus (Asian swallowtail): 106116052
Entry
106116052         CDS       T07456                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
pxu  Papilio xuthus (Asian swallowtail)
Pathway
pxu03030  DNA replication
pxu03410  Base excision repair
pxu03420  Nucleotide excision repair
pxu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pxu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106116052
   03410 Base excision repair
    106116052
   03420 Nucleotide excision repair
    106116052
   03430 Mismatch repair
    106116052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pxu03032]
    106116052
   03036 Chromosome and associated proteins [BR:pxu03036]
    106116052
   03400 DNA repair and recombination proteins [BR:pxu03400]
    106116052
DNA replication proteins [BR:pxu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106116052
  DNA Replication Termination Factors
   ELG1-RFC complex
    106116052
Chromosome and associated proteins [BR:pxu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106116052
DNA repair and recombination proteins [BR:pxu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106116052
  Check point factors
   HRAD17(Rad24)-RFC complex
    106116052
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_14 AAA_11 RuvB_N DUF815 AAA_16 AAA_5 AAA_30 AAA_7 PhoH DEAD AAA_3 ResIII AAA_19 Mg_chelatase LisH_TPL bpMoxR AAA_24 Gp44_lid Thioredoxin_6 Sigma54_activ_2
Other DBs
NCBI-GeneID: 106116052
NCBI-ProteinID: XP_013165235
UniProt: A0AAJ6Z4J7
LinkDB
Position
Unknown
AA seq 335 aa
MTVGESGKNLPWVEKYRPSKLEDLVSHDDIIKTIGQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTDNVRFCIICNYLGKIIPALQSRCTRFRFAPLQHVQIVPRLRDIV
EKENVKISEDGIQALLELSGGDMRKVLNTLQSTWLSARNVTEDTVYTCVGHPLRADIDSI
LTRLMNEDDFGVCFKFIQDLKILKGLALGDILTEIHTKIQRVKFPPDVLISLLIKMADSE
ARLASGCSERIELAALIAAFHLARQQIDITAIANS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaccgtgggagaatcgggaaaaaatttaccatgggttgaaaaatacaggccttcgaag
ttagaagacttagtttcccacgatgatattataaagactattggtcaatttatgaaagaa
aatcaattgccacatcttttattttatgggccaccgggcacagggaagacatcaacaatt
ttagcttgtgccaaacaaatgtatactccacagcaatttaattctatggtacttgaattg
aatgcatctgatgacagaggaattggaattgtaagaggacaaatcctcagttttgcttca
acaagaacaatattcaaggcaggtcccaaactcataattttagatgaagctgatgcaatg
acaaatgatgcacaaaatgctttgagaagaataatagagaagtacacggataacgttcgc
ttctgtataatctgcaactacctcggcaagataatacctgcgctacagtcgcgatgcact
cgctttaggttcgcccctctacaacacgttcagatcgtaccaaggctacgggatatcgtt
gaaaaagaaaatgtaaaaatatcagaagacggtattcaggcgctgcttgagttgtccggc
ggggatatgcgtaaggtgcttaatacgctgcagagtacttggctttcggcgcgtaatgtc
accgaggacaccgtctacacgtgcgtcggacacccgctgcgtgccgacatcgatagcatt
ctcaccaggctcatgaatgaagacgactttggggtatgcttcaaatttattcaagacttg
aaaatattaaaaggattagcacttggcgacattttaacagagattcatacaaaaattcaa
agagtgaaattcccgccggacgtcttgatatctctattaatcaagatggcggattcggag
gcgcggctggcgagcgggtgcagcgaacgtatcgagctggccgccctcatcgccgctttc
cacctcgccaggcaacagatcgatatcactgctatagccaactcttga

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