Papilio xuthus (Asian swallowtail): 106116333
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Entry
106116333 CDS
T07456
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106116333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106116333
03009 Ribosome biogenesis [BR:
pxu03009
]
106116333
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106116333
Spliceosome [BR:
pxu03041
]
Complex A
U2 snRNP components
U2 related factors
106116333
Complex B
106116333
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106116333
Ribosome biogenesis [BR:
pxu03009
]
Eukaryotic type
90S particles
Helicases
106116333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
ABC_tran
Flavi_DEAD
AAA_25
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
106116333
NCBI-ProteinID:
XP_013165575
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MSKRRIEVMDPFIKRKREEKAAAAAKAGTTSDTSETASTTMATVPQATTSTPGINPYTGL
PHSQRYHELLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWSVEFAAVT
AGKSTGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGML
LREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKFQ
QYFDNAPLMNVPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHLCEEIAGDILLFLTGQEE
IEDACKRIKREIDNLGPDAGELKCIPLYSTLPPNLQQRIFEPAPPNRPNGAIGRKVVVST
NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKC
FRLYTEKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE
LLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFV
RPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVR
QQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQL
HPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELNNFPQCEARRQLE
LLQARLDSKAYQEGF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagagaagaattgaagttatggatcctttcattaagaggaaaagggaagagaag
gcagcagcagctgcaaaagcaggtaccacaagtgacacatcagaaacagcgagcaccaca
atggctacggtaccgcaggctactactagtacgccaggaataaacccatatacaggtctg
ccacattcccaacggtaccatgagttgcttcgacgtcgactcggacttcctgtatgggag
tataaaaacgactttatgagattgttaaatacccatcaatgtgtggtattggttggtgag
actggttccggaaagacaactcaaatacctcagtggtcagtggaatttgctgcggttact
gcagggaagtcaacaggagttgcttgtacgcagccaagaagagtagcagctatgtcagta
gcacagagagttgcggaggagatggatgtagcgttgggccaacaagttggttatagcatt
cgttttgaagattgttccggacctcagacggttttgaaatatatgacagacggtatgttg
ctaagagaagcaatgtctgacccaatgctcgaacagtatagagtaattttacttgatgaa
gctcatgaaaggacccttgcaacggatatcctgatgggtgtgttgaaggaagtgatcaaa
cagagatcggatttgaaattagttatcatgtccgcaacattagatgctggaaagttccag
cagtactttgataatgcaccgttgatgaatgtaccaggtcgaacgcaccccgtagaaata
ttctacacgcctcaacctgaacgagactatttagaagctgctatacgaacagtaatacaa
attcatctatgtgaggagattgcgggtgatattttactatttttaacgggtcaggaagaa
attgaagatgcatgtaaacggataaaacgagagattgacaatttaggtccggatgctggt
gaattaaagtgtataccactgtattctaccttgccgcctaatttgcagcagaggattttt
gaaccggccccacctaatcgtcctaatggggcaataggacgtaaagttgtcgtctcaact
aacatagccgaaacttctctaactatagatggtgtagtgtttgtaatagatccaggattt
gctaagcagaaagtgtacaatccacgtatcagagtggaatccttactggtgtctccgatc
agtaaggcatcagctcaacaaagggcaggtcgtgctggacgtacgagaccggggaagtgt
ttcaggctttacacggagaaagcttataagaacgaaatgcaggataatacgtatccggag
attctgagatcaaacttaggatctgtagttttgcagctgaagaagctgggtatcgacgat
ctggtgcactttgacttcatggacccgccagctccggagacgctcatgcgtgcattggaa
ttgttaaactatctcgctgcactcgatgacgacggcaatctgacagacctgggtgctgtg
atggcggagttcccacttgacccgcagttagccaagatgctgatcgcaagctgcaaccat
aattgttccaacgagattctgtccatcacggctatgctttccgtgccacaatgttttgtt
agacctaacgaggctcgtaaagcagctgatgaagctaagatgcgtttcgctcacatcgac
ggagaccatcttacattgctcaacgtgtaccacgcgtttaaacagaatatggaggatccc
cactggtgctatgacaactttatcaactaccgttcactcaagtccggcgataatgtgcgg
cagcagctcagcaggattatggacaggttcaatttgaaacggacgagcactgaatttaca
agcaaagattactatatcaatataaggaaagcacttgttaatggattctttatgcaggta
gcacatttggaacgtacaggccactatctgacggtaaaggataaccaagtggtgcagctg
catccgtccacctgcctcgaccacaagcccgactgggttatatacaatgagtttgtactc
acaacaaagaattatatacgcacagtcaccgatattaaaccggaatggttactcaaaata
gcaccacagtactacgagttgaacaacttcccgcaatgcgaggctcgtcgtcaactcgag
ctgctgcaggccaggcttgactccaaggcctaccaggagggcttttaa
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integrated database retrieval system
