KEGG   Papilio xuthus (Asian swallowtail): 106116462
Entry
106116462         CDS       T07456                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pxu  Papilio xuthus (Asian swallowtail)
Pathway
pxu03013  Nucleocytoplasmic transport
pxu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pxu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106116462
  09122 Translation
   03013 Nucleocytoplasmic transport
    106116462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxu03019]
    106116462
   03041 Spliceosome [BR:pxu03041]
    106116462
Messenger RNA biogenesis [BR:pxu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106116462
Spliceosome [BR:pxu03041]
 Complex C
  Other components
   EJC/TREX
    106116462
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106116462
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT122_1st eIF2A Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 RMC1_N Beta-prop_TEP1_C Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 WDR90_beta-prop_4th NBCH_WD40 PD40 Beta-prop_EIPR1 Beta-prop_ELP1_1st Peptidase_S9_N Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_WDR11_1st CNH
Other DBs
NCBI-GeneID: 106116462
NCBI-ProteinID: XP_013165771
UniProt: A0A194PRC5
LinkDB
Position
Unknown
AA seq 328 aa
MRDPKQTQTPIEDLAELRSYFASHNVVREYIAHTSKVHSVGWSCDGRRLASGSFDKSVAI
FNLEKSKLVQDFVFKGHTGSVDQLCWHASHADLLSTASGDKSVRIWDTRSHKCAASISTK
GENINIAWSPNGSTIAVGNKEDLVSFIDTRTYKVVTEEQFNFEVNEISWNNDSDLFYLTN
GLGCVHIMTYPGLHLQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWHVQELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHVIDIGDTETGEKVAEIPVQAATFTVAWHPSRYL
VAFACEDKEPPERKRDAGNLKLWGLPNN
NT seq 987 nt   +upstreamnt  +downstreamnt
atgagagatcctaaacagacacaaactccgatagaggatttagcagaactgcgaagttat
tttgcttcacataatgtcgttagagaatatatagcgcatacatcaaaagttcattccgtt
ggttggtcgtgtgatggaagaagacttgcctccgggtcctttgataaaagcgtagctata
tttaatttggaaaaaagcaaattggtccaggattttgtattcaaaggtcacacagggtct
gtagaccagttgtgttggcacgcctcgcatgcggacctcctcagcacagccagtggtgac
aaatctgttaggatatgggataccagatcacacaaatgtgcggccagtatatcaacaaag
ggtgagaatataaacatagcgtggtctcccaatggtagtactatagcagttggcaacaag
gaagatcttgtctcatttatagatacacgaacttacaaggtggtgaccgaggagcagttt
aactttgaagtaaacgaaatctcttggaacaatgactctgatctcttctatctcaccaat
ggactgggctgtgtacatattatgacgtatcctggtctccacctccagacagtgttaaag
gctcatccaggcacttgtatatgtattgagcatgaccctacaggccggtacttcgctaca
ggctccgctgatgcccttgtgtcactctggcatgtacaggaattggcctgtctgagagtc
ttctctaggttagaatggccggtgcgcacattgtcattcagttttgatggtcgtctactg
gcctccgctagtgaggaccatgttattgacattggagacacggagacaggtgagaaggta
gcagagatcccagttcaggcagccacattcacagtggcatggcatccaagccgctatctg
gtggcctttgcatgtgaagacaaggagccaccggagcgcaagcgagacgctggcaatctc
aagttatggggactgcctaataactag

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