Papilio xuthus (Asian swallowtail): 106116837
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Entry
106116837 CDS
T07456
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106116837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxu03400
]
106116837
DNA repair and recombination proteins [BR:
pxu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106116837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
106116837
NCBI-ProteinID:
XP_013166336
UniProt:
A0AAJ7E7T3
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MSKRNSNNVGNTLFNYFTRTPPSNKKLKPSNESNNDSSTSKLDSPKSSKVESNKRERQPT
PPDVNNTLDDSDKDIPVSSKKRKRIRLNPVDSDDSDAENKEVKTPSETKDTLHKRLQDSF
KYDPNESPKSSKEKKASVNGKSKAQAKPIEQETAAPAEDGDWVHCKLDWLKPEKIRDANK
RRPDHPDYDPTTLYVPPDFYITQTPGHKQWWDMKSAHFDCVLFFKVGKFYELYHMDAAVG
VNELGFSYMKGQFAHSGFPESAYGRMASTLVSKGYKVARVEQTETPEMMQERCKKLGQTS
KNDKVVRREICQVSVRGAQVCGLQDSGPADATAVYLLAIAEEECNGCSTYGVCFVDTSIG
QFHLGQFQDDKHSSRLLTTLAHFPPALLVYDRKHTSVRSIKLLSTHCHSARREPLSMWSP
DKTLKTLSEKYYRTNADGNWPEGLKRFLHEGDALGLTPATECYLAIKALGGCVAYLSQCL
LDIQILDMAQFNEYCPPDVVNMTLTPEDKAQNQWRGGNTMVLDAVTLRNLRIVNDEGCLY
DKLNFCSTAMGKRLLYQWVCSPSCSLSVIKQRQQAVKTLLDNQELCQDAKNILTTLPDLE
RLLAKVHALGNLKRSQNHPDGRAIFYEERTYSKRKVLDFISVLQGFTAGLKLNELFSDTE
SELLKNLTQFTPDGKFPDYRDTLKFFKEAFNQQEAEKEGRILPGRGVDQEYDAALAQIQQ
IQDELKEYLVEQEKYFKCRLSYVGTDKKRYQLEVPQNSAAKAGSEYHLEGARKGFKRFST
AETKNFLARMIAAEDQKSSILRDLSRRILEKFSSHYTQWEAAVNCLATLDVLMSLAEYAR
QQTGNICLPDVTYDSNTKPYIKIVEGRHPCIPIVDEFIPNDTSLGDGGSLLLLTGPNMGG
KSTLMRQVGLLTVLAHLGSYVLAEECSLSIVDRIFTRLGAADDILSGQSTFLLEMNETAA
IVKHATQHSLVLLDELGRGTSTYDGTAIACAVCAALAERGCRCVFSTHYHALVRYVAALP
GLTLGHMACMVETEETDTDDIPEETITFLYKLTPGSCPKSYGFNAARLAGIPKDITQRAQ
RISKNLEKEATCARAFRDIFKNTDASGLRELLSSLTI
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgtaatagtaataatgtaggaaatactctgtttaattattttactagaaca
cctcctagcaacaagaagttgaaaccaagtaatgaatccaataacgattcttccacttca
aagttagacagtccgaaatcgtcaaaagttgaaagtaataaacgtgaaagacaaccgaca
cctcctgacgttaacaacactttggacgacagtgacaaagatattccagtttcttctaaa
aagaggaaaaggatacgtctaaatccggtcgattcagatgactctgatgcagagaacaaa
gaggttaaaacaccatctgaaacaaaagatacattgcataaacgactgcaggacagtttt
aaatatgatccaaatgaatcacccaagagtagcaaagaaaagaaggcttctgttaatggc
aaatcaaaggcgcaagcaaaaccaattgaacaagaaacagcagctccagcagaagatggg
gactgggtccactgtaagttagactggctcaaacctgagaagattagagatgccaacaag
aggagaccagatcaccctgattatgatcccacaacattatatgtgccgcctgacttttat
attactcaaaccccaggacataagcaatggtgggacatgaagtcagctcattttgactgt
gtgttattcttcaaagtgggcaaattctacgaactttatcatatggatgcagctgttggg
gtcaatgaacttggattctcatacatgaagggtcaatttgctcattctggattcccggaa
agtgcatatggtcgtatggcatccacattagtatcgaaaggatacaaagtggcgagagtc
gagcaaacagagacgccagagatgatgcaagagaggtgcaaaaagttgggtcaaacaagt
aaaaacgacaaggtggttaggcgcgagatctgccaagtatctgtgcgcggcgctcaggtg
tgcggcttgcaagactctggccccgcagacgccaccgccgtctacctgctggctatcgct
gaagaggagtgcaatggctgcagtacatacggcgtgtgctttgtggacacgtcaatagga
cagttccacctcggccagttccaggatgacaagcacagctccagactcctcaccacactc
gctcacttcccaccggcattgttagtatacgatcgaaaacacacgtcagttcgtagtatc
aagttactatcaacccattgtcatagtgcacgtcgcgagccattgtctatgtggtcacct
gataagactttaaaaactctctcagagaagtactacaggactaatgcagatggaaactgg
ccggaaggactgaagagattcttacatgaaggcgatgcattaggtctaactccagctacc
gaatgttatttagccattaaagcattaggcggttgtgtagcatacctaagtcaatgttta
cttgacatacaaatattagacatggctcagttcaatgaatattgtccacctgacgttgta
aacatgaccttaacaccagaagataaggctcaaaatcaatggcgtggtggtaatactatg
gtattagatgctgtgactttaagaaatctgagaattgttaatgatgaaggatgtttgtat
gataaattgaatttctgttccactgctatgggtaaaagactgctataccaatgggtgtgc
tctcccagctgtagtctgtcagtgatcaaacaacgtcaacaagctgtcaagacattactt
gacaaccaagagctctgtcaagatgctaagaatatcctcacaactttacctgatttggaa
agactactggccaaagtgcatgctttgggtaatttaaaacggtcgcaaaaccatccagat
ggtcgtgctatcttctacgaggagagaacatactcgaagcgtaaggttctggattttatc
tcagtattgcaaggatttacagcgggtttgaaactgaatgagttattttctgacactgaa
tcggagctattgaagaatttaacacaattcacaccagacggaaagttcccggactacaga
gataccttgaaattctttaaggaagcatttaaccaacaagaggcggagaaggaaggtcgt
attttgccgggacgtggagtcgaccaggaatacgacgccgcgctcgctcagatacagcaa
atacaagacgaattaaaagaatatcttgttgaacaagagaaatatttcaaatgtcgtttg
agctacgtgggtacggacaagaaacgttaccagctagaagtgccacagaacagcgcggca
aaggcaggctctgaatatcatctagagggcgctaggaaaggattcaagaggttttccact
gctgagaccaagaacttcctcgcccgtatgatagccgctgaggatcagaagtcgagcata
ctccgggacttaagccggaggatactggaaaagttctcgtctcactacacgcagtgggag
gccgctgtcaactgccttgcaacactcgacgtactaatgtcactcgcggagtatgcacga
caacagacgggcaatatatgtctgcctgatgtcacgtatgatagtaatactaagccatac
atcaagatagtggaaggtcgtcatccatgtatacctatcgtggatgagttcatccccaac
gacacatcactaggggatgggggaagcctgttgctgctgacaggaccaaacatgggcggc
aagtccacactcatgcgtcaagttggattgcttactgtactggcacatctcggtagctac
gtgctggcggaggagtgcagcctcagtatagtggaccgcatcttcacgcggctgggcgcg
gcagacgacatcctgtcagggcagtccactttcctgctggagatgaacgagacggcggct
attgtgaaacatgccacgcaacactcgcttgtactgctcgatgagttgggtcgcgggacg
tcaacgtacgacggtacggcgatagcgtgcgcggtgtgcgcggcgctggcggagcgcggc
tgtcgctgcgtcttcagcacgcactaccacgccctcgtgcgctacgtcgccgcactgccc
ggacttacactggggcatatggcctgcatggtagagacggaggaaacagacacagatgat
ataccagaagaaacaataacattcttatacaaattgactccgggctcatgccccaagtca
tatggtttcaacgcagccagacttgccgggatacctaaagacatcacacaacgagctcag
aggatatccaagaacttggagaaggaagcgacatgcgcaagagcattcagagatatattc
aagaatacagatgccagtggtttgagagagctgttatcatctttaactatttaa
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