Papilio xuthus (Asian swallowtail): 106118121
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Entry
106118121 CDS
T07456
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106118121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106118121
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106118121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
106118121
NCBI-ProteinID:
XP_013168130
UniProt:
A0AAJ6Z9Y1
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MAETAMETAPTDDNDDNWLYGESNNDQGESETAQNSDKTELPKESAEVAADNEEKEPDEN
DGNNEDSQFNDEHFADVGRDDQDQGNDADSQDNGDSDSDDSDDVKVTIGEIKSGPQYGSL
NIKRGVGLVASGVSEKPRGGTTTGNKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPG
ADISDYFNYGFNEVTWSAYCERQRRLRVSEAGVGLHAPPPQRPPPQDRGRNLGPMRTDEA
MQPPMQNNYQVRENTIQVMTAERREYGRGGHVRDGPPEYFGAPPPDHYYPPAHAPAHPPY
DEPWGHPEAGGWAPTEIKELTPGPLAMGPPPSAPVPPPAGFPPPFRGHPHAPHPHAHPHA
GYERDRDRDRDRDRERDRRDRDRRDEDERERDRDRDRERSRSIKPDRVREKSYRRERSRS
RSHRHKSRSRSPRPRERSRDRDRSRDRDRDRDRERSNKSKTKDTKEKEDEK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcagagactgcaatggaaacggcgcccactgatgataatgatgataattggttatat
ggtgaatccaataatgatcaaggtgaaagtgagaccgcacaaaatagcgataaaacggaa
cttccaaaggaatcggcagaagtagccgcggataacgaagaaaaggaaccagatgaaaat
gatggaaataatgaagattctcaattcaatgatgagcattttgcggatgtgggtagagac
gaccaagatcaagggaatgatgcggacagtcaggataacggagactcagactctgatgac
agtgatgatgtgaaagtgactatcggtgaaattaaatctggccctcaatatggaagttta
aatattaaacgtggtgtgggtctggtggcatcgggagtaagtgagaagcctcgtgggggc
accactactggtaacaaagtgactctagaagatctcgaaggaccaggcagtattaatggt
gtaccagctttggagtttaacattgacacaattgaagacaaaccgtggaacaaacctggt
gctgatatatctgattatttcaactatgggttcaatgaggtgacgtggagcgcatactgc
gagcgtcagcggcggctacgtgtgagtgaggcaggcgtgggcctgcacgcgccaccgccc
cagcgtccgccaccgcaggaccgcggccgcaacctcggtccgatgagaaccgatgaagct
atgcagccaccaatgcagaataactatcaagttagggagaataccattcaagtgatgact
gcggagcggcgcgagtacgggcgcggcggacacgtgcgcgacggaccgcctgaatacttc
ggcgcgccgccgcccgaccactactacccgcccgcgcacgcccccgctcacccgccatac
gatgagccctgggggcatcccgaagccggaggctgggcgccgactgagataaaagagttg
acgccgggaccgttggcgatgggcccgccgcctagcgcacccgttccaccacccgctggt
tttccgccgccattccgcgggcatccacacgccccacaccctcacgctcacccgcacgcc
ggctacgagcgcgaccgtgacagggaccgggaccgcgacagagaacgggaccgcagagac
cgcgacaggcgcgacgaggatgagagggaaagagaccgagaccgtgatcgcgagcgctca
cgctctataaagcctgacagagttcgggaaaaatcgtacagacgagagcgttcgcggtcg
cgttcgcaccgccacaagtcgcggtcgcggtcgccgcggccacgcgaacgttcgcgagac
cgagatcgctccagagaccgcgatcgagaccgagaccgcgaacgaagcaacaagtccaag
actaaggacactaaagagaaagaagacgagaaatga
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