Papilio xuthus (Asian swallowtail): 106118184
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Entry
106118184 CDS
T07456
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03020
RNA polymerase
pxu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106118184
09124 Replication and repair
03420 Nucleotide excision repair
106118184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxu03021
]
106118184
03400 DNA repair and recombination proteins [BR:
pxu03400
]
106118184
Enzymes [BR:
pxu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106118184
Transcription machinery [BR:
pxu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106118184
DNA repair and recombination proteins [BR:
pxu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106118184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106118184
NCBI-ProteinID:
XP_013168200
UniProt:
A0AAJ6ZA70
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MYDTEDDQFEEEDNEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHSSGEIETPPKYLLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKENEEPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQSIKKSAIGQRIIAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDHLKERDYNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQVKEYAYCSTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRLGDQEEQFEKPTRQTCQG
MRNALYDKLDEDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTRRYTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacaccgaagatgaccaattcgaggaggaagataacgaggaaatttcatcggaa
ctgtggcaagaagcttgttggattgttatcaacgcttattttgatgaaaaaggcttagta
cgccaacaattggatagtttcgatgaatttatacagatgtcagtacaacgtatcgtagaa
gattctccccctattgaattacaagcagaagcgcaacactcgtccggtgaaatagaaacg
cctccgaagtatttgttgaaatttgatcagatttatttatcaaaacctacccattgggaa
aaagatggagcaccatctcctatgatgcccaatgaggcccgccttcgtaacttaacctat
tctgcaccgttgtatgttgacattactaaaactattgtaaaagaaaatgaagaacctatt
gaaacacagcatcaaaaaacatttattggaaaaattcctataatgttaagatctacttat
tgtctactaagcaatttaactgacagggatttgaccgagttaaatgaatgcccactcgat
cccggtggttattttattattaatggatctgaaaaggttttgattgctcaggaaaagatg
gctacaaacactgtgtacgtgttcagcatgaaggatggaaagtatgcttataaaactgaa
attcggtcatgtcttgaacacagttcgcgaccaacatccaccttatgggtcaacatgatg
gctaggggtggtcaaagcatcaagaagtctgcaattggtcaaagaattattgccattgta
ccatacattaagcaggaaattcctattatgattgtgtttagagctcttggatttgtagct
gacagagacatattagagcatattatatatgattttgatgacccagaaatgatggagatg
gtaaaaccatctctggatgaggcgtttgtaattcaagaacaaaatgtggctctcaacttc
atcggtgcacgtggtgcacgaccgggagtgacaaaggaaaggcgcataaagtatgcccgt
gaaattttgcaaaaagaaatgttaccccatgttggtgtctctgatttttgtgaaacaaaa
aaagcttacttcctcggatacatggtacacagattactcctggctgctctaggtcgccgt
gaattagatgacagagatcattatggaaataaaagattggatcttgctggacctctgcta
gcttttctatttagaggattgtttaagaacctattgaaagaagtaagaatgtatgctcaa
aaattcattgatagaggaaaagatttcaatcttgagttagctataaagacaaagatcatt
actgatggcttacgctactcgctggctactggcaattggggagatcaaaagaaagctcat
caagcaagagcaggtgtatcccaagtattaaacaggctaacttttgcttctaccttgtcc
catttgagacgtgtaaattcacctataggtagagatggtaaattggccaaaccccgtcaa
ttacacaacacattgtggggtatgatttgtcctgctgaaactccagaaggtgcagctgta
ggcttagtgaaaaacttggctttaatggcatatatttcagttggaagtcaaccatctcca
attttagagttcttggaggagtggtcaatggaaaatctagaagaaattgccccgtcagct
attgcagatgcaacaaaaatatttgtgaatggatgttgggttggtattcatagagatcct
gagcaacttatggctacattaagaaaacttagacgccagatggatattattgtttctgaa
gtcagtatgatccgtgatataagagatcgtgaaataagaatttatactgatgcaggaaga
atttgcaggcccttactgatagttgaaaatggagctttactgttaaagaagaaacatatt
gatcatcttaaagaaagagattataacaattatggttggcaaaatttagttgctagtggt
gtagtggaatatattgatacattagaagaagaaaccgtaatgattgccatgagccctgat
gatttagcacaagttaaagagtatgcttactgttcaacatacacacattgtgaaattcat
ccagctatgattttaggtgtttgtgcatctataattcctttcccagatcacaatcaaagc
ccaagaaatacatatcaaagtgctatgggtaaacaagccatgggtgtttatattactaat
ttccatgtcaggatggatacgctggctcatgttctgtactatccacataaacctttggta
accacacggtccatggaatacttacgtttccgagaattgccagcaggtattaattcaatt
gttgccatcttatgttacacaggatacaaccaggaggacagtgttattttaaatgcatct
gctgttgaaagaggattttttagatctgtattttaccggtcatataaagattcagaatca
aaaaggctaggtgatcaagaggaacaatttgaaaaacctacaagacaaacatgtcaagga
atgcgaaatgccttatatgataaattagatgaggatggtattattgcgccaggaattcga
gtttcaggcgatgatgttgtgattggaaaaacgatcacgctccctgaaaatgacgatgag
ctcgaagggacaacaagacggtatacgaaacgtgatgcttcgacatttttgcgaaacagt
gaaactggaattgttgatcaagttatgctgacactgaacagtgaaggttataaattttgt
aagatacgcgttcgatcagtacgcattcctcaaatcggtgataagttcgcttcacgtcac
ggtcaaaagggaacctgcggaatccaatacagacaagaagatatgccatttacttgtgaa
ggccttacaccggacattattattaacccacacgctattccatctcgtatgacaattggt
cacttgattgaatgcattcaaggtaaagtttcatccaataaaggtgaaattggtgatgca
acaccctttaatgatgctgttaatgtgcaaaaaatatcgtcgctattacaagaatatggt
taccacctacgtggcaatgaagttatgtacaatggtcacactggtcgcaaaataaatgct
caagtattcttagggccaacatattaccagcgtcttaagcacatggtagatgacaaaatt
cactcccgagctcgaggacctgtgcaaattttagtaagacagcctatggagggcagagct
cgcgatggcggtttacgttttggagaaatggagcgcgattgtcaaatcgcgcacggcgcc
gctcagtttctcagagagcggttgtttgaagtgtctgatccttatcgtatacacgtttgc
aacttctgtgggttgatagccattgcaaacttaaggaataatacatttgaatgcaaaggc
tgtaagaataaaactcaaatatcccaagtgaggttgccatatgctgccaagttgcttttc
caagagctgatgtcaatgaacattgcaccaagattgatggtagtaaactag
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integrated database retrieval system
