Papilio xuthus (Asian swallowtail): 106118321
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Entry
106118321 CDS
T07456
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106118321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106118321
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106118321
Spliceosome [BR:
pxu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106118321
Complex C
U4/U6.U5 tri-SnRNP related factors
106118321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
T2SSE
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
106118321
NCBI-ProteinID:
XP_013168413
UniProt:
A0A194PJX5
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MDKRGKRQHSSSDSDSAEEQRKKDIKERDEFAKRLKKRDEEKVKKVTESTSKRSYEEAAK
RFKLEADDRNKILPKLRVQSRRKYLEKRKEDKVLELEADIADDEYLFDESVLTEKEKKER
EHKKTILQLAKEHEKARELENVQRYHMPRDLGKGEKGEYIEVDENEKLPHSEQRKWEQEQ
IKSAFFKFGAKDAKAQDEYELLLDEQIDFIQALQLEGNKEKKEDEEKSEYQKIRMTIEET
KKSLPVYPFRDSLIEAIKNYQILIVEGETGSGKTTQIPQYLHEAGFTEDGKKIGCTQPRR
VAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSDRTVIKYMTDGTLHREFLSEPDLASYS
VMIIDEAHERTLHTDILFGLVKDITRFRPDLKLLISSATLDAEKFSNFFDEAPIFRIPGR
RFPVDIYYTKAPEADYVDASVVSILQIHATQPLGDILVFLTGQEEIETCVEMLQDRTKRL
GKKIKELLILPVYANLPSDMQAKIFEPTPEGARKVVLATNIAETSLTIDNIIYVIDPGFA
KQNNFNSKTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKYELEDNTVPEI
QRINLGNAVLTLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKAGRRM
AEFPTDPMLAKMLLASEKYKCSEDVVSIAAMLSVNSSVFYRPKDKIIHADTARKNFFHRN
GDHLTLMNVYNQWVGSDYSVQWCYENFIQYRSMKRARDVREQLVGLMERVEIDMVSSISD
DTNIRKAITAGYFYHIAKFSKGGHYKTVKHNQTVMIHPNSALFEELPRWVIYHELVFTSK
EFMRQVTEIESKWLLEVAPHYYKSNELEDSTNKKMPKTLGKSASK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacgtggaaagcgacagcactcgtcatcggattctgatagcgcagaagaacag
cggaaaaaggacattaaagaacgagatgagtttgcaaagagattaaagaaacgcgatgaa
gaaaaggttaaaaaagtaacagagtctacaagtaaacgatcttatgaagaagcggccaaa
cgctttaaattggaagcggacgacaggaacaaaatactaccaaaactcagagttcaatct
cgccgaaaatatttggagaagagaaaagaagataaagttttagagttagaagcagacata
gctgatgatgaatatctgtttgatgaaagtgttttaacagaaaaggagaagaaggagaga
gaacacaagaaaaccatattacaattagccaaggagcatgagaaagcaagagagttggaa
aatgtacaaagatatcatatgcctagagatttgggtaaaggtgaaaaaggtgagtatatt
gaagtcgatgaaaatgaaaaactaccacattcagaacaacgaaagtgggagcaagaacaa
ataaaatctgcattctttaaatttggagcaaaagatgcaaaagcacaagacgagtatgaa
ctcttgctcgatgaacaaattgattttattcaagcactccaattggaaggtaacaaggag
aagaaagaagatgaagagaaatctgaatatcaaaagatacgtatgacaattgaagaaact
aaaaaatctcttccagtttatcctttcagagactctttgattgaagctattaaaaattat
caaatactaatagtagaaggtgagacaggatcaggtaaaacaactcagattccacaatat
ttacatgaagctggatttacagaagatgggaaaaaaattggatgtacacaaccaagaaga
gttgctgccatgtcagtagcagcaagagttgctcaagaaatgaatgtcaagcttggaaat
gaagttggatacagcattcggtttgaagattgtacatctgatagaactgttattaaatat
atgacggatggaacactacatagagagtttctatcagagccagacttagcttcttacagt
gttatgataattgatgaagctcatgaacgtactttgcatactgacattttatttggtttg
gtaaaagacatcactagatttagacctgatttaaaattacttatatctagtgcgacatta
gatgctgagaagttctcaaacttttttgatgaagcgccaatttttcgtatcccaggaaga
aggtttccagttgatatttattacaccaaagctccagaagctgattatgtagatgccagt
gtagtgtctattctgcaaatacatgccactcagccattaggagatatactggtctttctc
acaggtcaagaagaaattgagacatgtgtagaaatgttacaggacagaactaaaagatta
ggaaagaagattaaggaactgttaatattaccagtatatgcaaacctaccaagtgatatg
caagcaaaaatctttgaaccaactccagagggagcccgtaaagttgtgttagctacaaat
atagctgaaacatcacttacgattgacaatattatatatgtaattgatccaggatttgca
aaacaaaacaattttaattccaaaactggcatggagagtttaatggtagttccaatatct
aaagcatcagctaatcaaagagctggcagagcaggaagagtggcaccgggtaaatgcttc
agactttatactgcatgggcatataagtatgaacttgaagataatactgtcccagaaatc
cagaggattaatttaggaaatgctgttcttactttaaaagcattaggaatcaatgacctt
attcattttgatttcttggatcctcctccccatgagacattagttctagctttggaacaa
ctgtatgcacttggagcacttaatcaccatggagaattaactaaggctggccgaagaatg
gctgagtttcccactgatcctatgctagctaaaatgctattagctagtgaaaaatataaa
tgttcagaagatgttgtaagcattgctgctatgctgtcagttaacagctcagttttttat
cgacctaaggataaaataattcatgcagatacagctagaaagaacttttttcatagaaat
ggagatcatttgacactaatgaatgtatataatcaatgggtgggctctgattattcagtg
caatggtgttatgaaaacttcatacaatacagatctatgaaaagagctcgagatgttcga
gaacaacttgtgggattgatggaaagagttgaaattgatatggtttcaagtatatcagat
gacacaaacatcagaaaggcaattacggctggatatttttatcacatagcaaaattttct
aaaggtggacattacaaaactgttaaacataatcaaactgtaatgatacatccaaacagt
gctttatttgaagagttaccgagatgggttatttatcatgaactagtttttacatcaaaa
gaatttatgagacaagttactgaaatagaaagtaaatggttactggaagtagcaccacat
tattataaatcaaatgagttggaggattcaacaaataaaaaaatgccaaaaactttagga
aaatcagcaagtaaataa
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