Papilio xuthus (Asian swallowtail): 106119706
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Entry
106119706 CDS
T07456
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106119706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106119706
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106119706
Spliceosome [BR:
pxu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106119706
Complex B
106119706
Complex C
U2 SnRNP specific factors
106119706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-GeneID:
106119706
NCBI-ProteinID:
XP_013170291
UniProt:
A0A194PS27
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSYNSGGSGGKGFGFAGFSMPKRNPSNVSLHAVPPPTTPMHAVPPPSTGLSKQGYSTMNA
ITQNAVAGNWGTLGKKRSKTEDEYFDDDDEPPTPALAYIPAPGSPTNDIASSSKADEDEE
DPLDAYMAGLEKQAAKDMVTSKENAIAGKEDSGRGTRGDIDELDDEESYYKYMEENPLAN
VGDESDQEIEYDQDGNPIAPPKKKIIDPLPPIDHSEITYEPFEKNFYVPHEEIENLTHQQ
VEDLKKSLGVKITGPDPPRPVSSFAHLGFDEQLMKAIRKSEYTQPTPIQAAGVPAALSGR
DLIGIARTGSGKTAAFLWPLLVHIMDQKELAPGDGPIGLILAPTRELAQQIYMEAKRFGK
VYNIRCVCCYGGGSKWEQSKALEGGAEIVVGTPGRMIDLIKCKATNLQRVTYLVLDEADR
MFDMGFEPQVRSICNHVRPERQALLFSATFPRRVERLARDALHDPVRVQHGAAGEACDLV
TQHVKIFNKPEDKWSWLLKNLVEFLSAGSVIIFVTKKLEAEQTAANLAVQEYDALLLHGD
MEQADRNKVITAFKRQENSILVATDVAARGLDIPHVRTVINYTVARDIDTHTHRVGRTGR
AGVRGHAHTLLARDRDREFAAHLLRNLEAVQQEVPEELLQLAMQSAWFRKSRFKKGKAKN
LNIGGCGLGYKERPGLPAYTEEPASVLGAGERLQGPATDRLASLKQAFRSQYNQFTASTD
HSWEQTLTSIQPGVNAPAAETAPAQPESKAERVRKSGKRSRWE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagttataattcggggggcagtggtgggaaagggttcgggttcgcaggattctcgatg
ccaaaacgaaatccttcgaatgtctccttgcatgcagttccacctccaacgacaccgatg
catgctgtaccaccgccaagtacaggcctctccaaacaaggatactcaacaatgaatgct
ataactcaaaatgctgtggctggtaattggggaacgctgggaaaaaaacgatcaaaaacc
gaagatgaatattttgatgatgatgatgagcctccaacaccagccttggcatacattcca
gcacctggtagtcccaccaatgacattgcttcaagctctaaggctgatgaagatgaagag
gacccactggatgcttatatggccggattagaaaagcaggcagctaaggacatggtcacc
agtaaagaaaatgcaatagctggtaaagaagacagcggcagagggaccagaggggatatt
gatgagttagatgatgaagaaagttactataaatacatggaagagaaccctcttgcaaat
gttggtgatgaatcagatcaagaaatagaatatgatcaggatggaaatccaatagcacca
ccaaagaagaagataatagacccgttaccacctattgaccattctgaaattacttatgaa
ccatttgagaagaacttctatgtgccacatgaggaaattgaaaacttaacacatcagcaa
gttgaagatttgaaaaaaagtttgggtgttaagataacaggtccggatcccccacggcca
gtaagcagcttcgcgcacttaggcttcgacgagcagttgatgaaggcgatacgcaaatca
gagtacacgcagcccacccccatacaggcggctggtgtgcccgctgcattgtccggcaga
gatcttattggtatcgcccgtactggttctggtaaaactgcagcgtttttgtggccactt
ttggtacatataatggatcagaaagagcttgctccgggggatggtcccattggcttaatt
ctggcacctaccagagaattagcacaacagatctatatggaagctaaacgttttggcaaa
gtgtacaatataagatgtgtgtgctgctatggtgggggatctaaatgggaacagtcgaaa
gctctagaaggtggtgctgaaatagtagtaggcactccaggacgtatgatagatcttatc
aaatgcaaggcgaccaacctgcagagagtcacataccttgtgttggacgaggctgataga
atgtttgatatgggattcgagccgcaggtacgttctatctgcaaccacgtgaggccggag
cgtcaggcgctgctgttctccgccacgttcccgcgtcgcgtggagcgcctggcacgcgac
gcgctgcacgaccccgtgcgcgtgcagcacggcgccgcaggagaggcctgcgacctcgtc
actcagcacgtcaagattttcaacaaaccagaggataaatggtcctggctgttaaaaaac
ctggtggagtttttatctgccggaagtgttattatatttgttactaaaaagctagaagcg
gagcagacagcagcgaacctggccgtgcaggagtacgacgcgctgctgctgcacggagac
atggaacaggcagacaggaacaaggtcatcaccgcattcaagagacaggagaacagcatc
ctcgtcgccactgatgtcgctgctcgtggtctggacatcccgcacgtgcgcactgtgatc
aactacacggtggcgcgcgacatcgacacgcacacgcaccgtgtcgggcgcacaggacgc
gccggagtgcgcggtcacgcacacacgctgctcgcccgggaccgcgacagggagtttgca
gctcatctgctgcgcaacctagaggccgtgcagcaggaggtgccggaggagctgctgcag
ctagcgatgcagtcggcctggttccgcaagtcgcgtttcaagaagggcaaggcgaagaat
cttaacatcggcggatgcggactggggtacaaggagcggcccggactgcccgcgtacacg
gaggagccggccagcgtgctgggcgcgggcgagcggctgcagggacccgccacagaccgc
ctcgcctcgctcaagcaagccttccgctcccagtataaccagttcactgcgtcaactgac
cactcgtgggaacagacgcttacatctatccagccaggagtgaacgcgcccgccgcagag
actgcgcctgcgcagcctgaatccaaagctgagagagtcaggaagagtggcaagaggagt
cggtgggagtag
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integrated database retrieval system
