KEGG   Papilio xuthus (Asian swallowtail): 106120631
Entry
106120631         CDS       T07456                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pxu  Papilio xuthus (Asian swallowtail)
Pathway
pxu03030  DNA replication
pxu03410  Base excision repair
pxu03420  Nucleotide excision repair
pxu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pxu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106120631
   03410 Base excision repair
    106120631
   03420 Nucleotide excision repair
    106120631
   03430 Mismatch repair
    106120631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pxu03032]
    106120631
   03036 Chromosome and associated proteins [BR:pxu03036]
    106120631
   03400 DNA repair and recombination proteins [BR:pxu03400]
    106120631
DNA replication proteins [BR:pxu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106120631
  DNA Replication Termination Factors
   ELG1-RFC complex
    106120631
Chromosome and associated proteins [BR:pxu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106120631
DNA repair and recombination proteins [BR:pxu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106120631
  Check point factors
   HRAD17(Rad24)-RFC complex
    106120631
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_16 AAA_14 RuvB_N Viral_helicase1 Rad17 AAA_18 MeaB AAA_19 AAA_11 nSTAND3 Mg_chelatase AAA_24 RCF1-5-like_lid AAA_assoc_2 IstB_IS21 ABC_tran NTPase_1 AAA_5 MipZ AAA_25 CbiA AAA_30 AAA_3 AAA_28 RNA_helicase MCM bpMoxR AAA_23 VWA_2 TerL_ATPase RsbU_N
Other DBs
NCBI-GeneID: 106120631
NCBI-ProteinID: XP_013171447
UniProt: A0AAJ6ZFH4
LinkDB
Position
Unknown
AA seq 359 aa
MSDDDVIVMEVDEAEPKIEKPIAAPSKPLGLLPWIEKYRPQTFEDIVGNEDTVSRLAVFA
RTGNAPNIIIAGPPGVGKTTTILCLARALLGAAFRDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPPGRHKIVILDEADSMTEGAQQALRRTMELYANTTRFALAANNSERIIEPIQSR
CAVLRYSRLTDAQILAKVIEVCRKEDLSYTEEGVNAVVFTAQGDLRAALNNLQATAQSGR
HVSPDNVFRVCDEPHPMLVRTMLEACTRQDIHQAYKVIAKLIKQGYAAEDIVSNMFRVCK
TLAVGEDLRLGLVREVGMTHMRVADGLGSSLQLAALLARMCRVAADAPHVPAAALGGAP
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgagtgacgacgacgtgattgttatggaggtagacgaagcagaaccaaaaatcgaaaaa
ccgatagcggcgccaagtaaaccacttggattgctaccatggatagaaaagtataggccg
caaacttttgaagacatcgtgggcaacgaggacacagtatcgcggctagcggtgtttgcg
cggacaggcaatgcccccaacatcatcatcgcgggtcccccgggcgtcggcaagacgaca
acgatcttatgcctggctcgcgctctgctcggtgcagctttccgcgatgccgtgctggaa
ctgaatgcgtctaatgaccgcggtatagacgtcgtgcgtaataaaataaaaatgtttgcc
caacaaaaggtaacgctgccgcctggtcggcacaagatagtgatactggacgaggcagac
agtatgacggagggggcccagcaagcgctgcggcgcactatggagctgtacgccaacacg
acgaggttcgcgctcgctgccaacaacagtgagcgcatcatagagcccatacagtcgcgc
tgcgccgtgctgcgctactctcgactcactgacgctcagatactcgccaaggttatagaa
gtgtgcagaaaggaagatttatcatacacagaggagggtgtgaatgcagtagtgttcaca
gcacaaggagatcttcgcgcggcgctcaacaatttgcaggcgacagcgcaatcgggccgc
cacgtcagccccgacaacgtcttccgcgtgtgcgacgaacctcaccccatgctcgtacgc
actatgctggaggcctgcacgcgacaggacatacaccaagcttacaaagtgatagcaaag
ctcattaagcagggatatgctgcggaggacatagtaagtaacatgttccgagtgtgcaag
acgctagctgttggggaggacctgcgtttgggcttagttcgcgaagtgggcatgacgcat
atgcgcgttgccgacggactcggctcctcgctgcagctggccgcactgctcgcgcgcatg
tgccgcgtagccgccgacgcaccccatgtccccgccgccgccctaggaggcgcgccctag

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