Papilio xuthus (Asian swallowtail): 106121224
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Entry
106121224 CDS
T07456
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106121224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106121224
03009 Ribosome biogenesis [BR:
pxu03009
]
106121224
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106121224
Spliceosome [BR:
pxu03041
]
Complex A
U1 snRNP components
U1 related factors
106121224
Complex B
106121224
Ribosome biogenesis [BR:
pxu03009
]
Eukaryotic type
Pre-60S particles
Helicases
106121224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106121224
NCBI-ProteinID:
XP_013172220
UniProt:
A0AAJ7ECV3
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MQFNGFHNQHPIFRPRLDQNEQFGKMPYYNGGVPDFGGPKNFNPRNMGNKNFRPRSDFNG
VRNDFNNQKNGNEFGGPKEYRPRNNFNNQQQNKNEYDGDKSPGNQFYNGQNDFGGPKQQG
FQKNNYGPKSFNGNQGNPNQQSYGQRKSYSPTMGQNHQQSMEFKGRKLQSMKAKHPGDAL
VKPMWDLSKLGPIMKDFYKPHVNVEGRTEEDVQMFRATKEITVSGNNVPRPNQMFDEGNF
PEHILNTIKEQGWEEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHIVHQQR
IQRGDGPIVLILAPTRELAQQIQSVAQAYSANGCIRNTCIFGGSPKGPQARDLERGVEIV
IATPGRLIDFLERGATNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT
WPKEIQALAEDFLNDYIKVNIGSLNLSANNNIKQIVEVCEEHEKEMKLANLLKEISSEKD
NKVIVFVETKKKVDDIARAVRRNGHKALAIHGDKSQPERDAVLTEFRNGATTILIATDVA
ARGLDVEDVKFVVNFDYPNSSEDYIHRIGRTGRCQQSGTAYTFFTSGDARQARGLVAVLR
ETGQNPPAKLNDMARNNNSGSGRNRWQQRKENNSGSSSPRQQNNQWNNKMANVTNEDNQN
NYQVRNQNQQAPRFTNQNQNNQGYRQNNYQKQVPFPSPTVFESMGNYQGGYTNGYQGNYN
NQNGYGQRQFTNTRNNGPQYRNNNSNNGNKSGGSGSSYGSPPPHFATPAHYPQMHPHHQD
MLGGKFYGGGVGGAGPCGYQAAVGAGVAYPHLPPGPLVYAAPIQQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaacggattccacaatcaacatcctattttcagaccacgacttgaccagaat
gaacaattcggtaaaatgccatactataatggtggtgttcctgattttggagggccgaaa
aactttaaccccagaaacatgggcaacaagaactttaggccaagatctgattttaatgga
gtgagaaatgactttaataaccaaaaaaatggtaatgaatttggagggcccaaggaatac
agaccaagaaataattttaacaatcaacagcaaaataagaatgaatatgatggagataaa
agcccgggtaatcaattctacaatgggcaaaatgattttggtggacctaagcagcagggt
ttccagaaaaacaactatggccctaagagtttcaatggtaaccaaggaaaccctaatcaa
cagagctatggtcaacgaaaatcatatagccctactatgggacaaaaccaccaacaatct
atggaatttaagggacgtaaacttcagagcatgaaggctaagcatcctggagatgccctt
gttaagcccatgtgggacctttcaaaactgggtccgattatgaaggatttctacaagcca
catgttaatgttgaagggcgcactgaagaggatgttcagatgttccgggctacaaaagaa
ataactgttagtggcaacaatgtgccacgtccaaaccagatgtttgacgagggcaatttc
cctgaacacattttgaatactatcaaagagcaaggttgggaagagccaacaggtattcag
gcccaaggatggcctattgctttatctggtcgcgatatggtgggcattgcttctactggt
tcaggcaaaacattagcttacatgcttcctgctgctgttcacattgttcatcaacaacga
atccaacgtggcgatggccccattgttctcatattggctcccactcgggagttggcacag
caaattcaatctgttgctcaagcttacagtgccaatggctgcatccgcaatacttgcatt
tttggaggttcaccaaaaggacctcaagctagggacttggagaggggagttgaaattgtc
attgctactcctggccgtttgatcgatttccttgaacgtggagctactaacttgcgtcgt
tgcacttatttggtgctggatgaggctgatagaatgctggacatgggttttgaaccgcag
attcgtaagatcattgagcagattagacctgatcgtcaagttttgatgtggtctgccaca
tggcccaaggagatccaagctttggctgaagatttcttgaatgactatatcaaggtgaac
attggctctttgaacctttctgctaataacaatatcaaacagattgttgaagtttgtgag
gaacatgaaaaagagatgaaacttgctaatcttctgaaagagatttcttcagaaaaagat
aacaaagttattgtatttgtggagacaaagaaaaaggtggatgatatagcgcgtgcagtg
cgccgcaacggccataaagctctggcgatccacggtgacaagtcgcagccggagcgcgat
gccgtgctgacggagttccgtaacggagccaccaccatcctgatcgccaccgacgtggct
gctcgaggcttagatgttgaagatgtaaaatttgttgtgaatttcgattacccgaattca
tcggaagattatattcatagaataggacgtactggtcgttgccagcaatctggaacagca
tatactttcttcacgagcggcgacgctcgccaggcacgcggactagttgcggtgctccgt
gaaactggccagaaccctccggctaaacttaatgatatggcgaggaataacaacagtgga
tcaggccgcaatcgctggcaacaaagaaaagagaataatagcggatctagctcgcctcgt
caacagaacaatcagtggaacaacaaaatggctaatgttaccaatgaggacaatcaaaat
aattatcaagttcgcaaccagaaccaacaagcacctcgcttcacaaaccagaaccagaac
aaccagggttatagacagaacaactaccagaagcaggtaccattccccagccccactgtg
tttgagtcgatgggcaattaccaaggtggatacaccaatggataccaaggaaactacaac
aaccaaaatggatatggccagcgtcaatttacaaatacccgcaataatgggccccaatat
cgcaacaataactccaacaacggaaacaaatccggtggatctggctcatcatacggatca
ccgccacctcatttcgccactcccgctcattatccccaaatgcacccacaccatcaggat
atgcttggtggcaagttctacggcggtggcgtcgggggcgcgggaccatgcggctaccag
gcagcggtgggcgccggcgtggcctacccgcacctgccgcccggcccgctcgtctatgca
gctcccatacaacagtaa
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integrated database retrieval system
