Papilio xuthus (Asian swallowtail): 106121296
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Entry
106121296 CDS
T07456
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106121296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxu03041
]
106121296
03009 Ribosome biogenesis [BR:
pxu03009
]
106121296
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106121296
Spliceosome [BR:
pxu03041
]
Complex A
U1 snRNP components
U1 related factors
106121296
Complex B
106121296
Ribosome biogenesis [BR:
pxu03009
]
Eukaryotic type
Pre-60S particles
Helicases
106121296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
106121296
NCBI-ProteinID:
XP_013172354
UniProt:
A0AAJ7ECY0
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSGNWNNSRGGSGGSKFGNHGSKFGGGGGGGGSRFGNSGGYGGGKKEFSGGQNMRRPNWD
TMSLQPFNKNFYNPPPEVLKRSSYEVEEYRNKHEITVSGLDIPNPIQHFEEGNFPDYVMQ
NISNMGYKEPTPIQAQGWPIAMSGHNLVGIAQTGSGKTLAYILPAIVHINNQPPIRRGDG
PIALVLAPTRELAQQIQQVACDFGNASYVRNTCVFGGAPKREQARDLERGVEIVIATPGR
LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK
KLAEDYLGDYLQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQSQEPGAKTI
IFVETKRKVENITRNIRRFGWPAVCMHGDKTQQERDDVLYQFKQGRASILVATDVAARGL
DVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVNVLQEANQ
TISPQLQTMADRCGGGGGGWNRSRYGGGRGGGGGSFRRGTSFGRSNGQGSGGHKRFNEY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaactggaacaatagtcgtggcggaagcggcggttccaaatttggtaatcat
ggatcaaagtttggtggtggcggcggcggtggtggaagtcgattcggaaactctggaggt
tatggaggagggaagaaagaattttccggtggacaaaatatgcgacgcccaaactgggat
actatgtccttacaaccatttaataaaaacttttacaatccaccaccagaagtattgaaa
agatcctcatatgaagttgaagaatatagaaacaaacatgagattactgtgagtggattg
gatataccaaatcctatccagcactttgaagaaggaaattttccagactatgtaatgcaa
aatatttcaaacatgggttacaaggaacccacaccaatacaagctcaaggttggcccata
gctatgtctggccacaacttggtggggatagctcagactggttcaggcaaaaccttagca
tatatattgcctgcgattgtgcatatcaacaaccagccccctattaggcggggcgatggc
cctattgctttagtattggcaccaactagagagctggcacaacaaattcaacaagttgca
tgtgactttggaaatgcatcatatgtacgcaacacgtgcgtatttggcggcgcgcctaaa
agggaacaggctcgtgacttagaaaggggtgtagaaattgttattgccacacctggtaga
cttattgatttcctggaaaagggaactacaaacttacaacgttgcacatatctagtacta
gatgaagctgatcgcatgttagacatgggttttgaaccccagattcgtaaaattattgaa
cagattcgacctgatcgtcaaactcttatgtggtcagccacatggcccaaagaggttaag
aagttagccgaagactatttgggtgactacttacaaataaacattggatctctacaactc
tctgccaatcataacattctacaaattgtagatgtttgccaagaacatgaaaaggagaac
aagttaaatgttcttttacaagaaataggccaaagccaagaacctggtgccaaaactata
atatttgttgaaacaaagaggaaagtggaaaatataacaaggaacatcagacggtttggc
tggccagctgtgtgtatgcatggtgacaaaacacaacaagaaagagatgatgttctctat
cagttcaaacagggtcgtgcaagcatacttgtagcaactgatgttgctgccagaggactt
gatgtggatggtatcaaatatgttataaactttgactatcccaactcttcggaagattac
attcaccggataggtagaacagggcgttcaaaatcaaaaggaacatcatatgccttcttc
acaccttcaaattcacgtcaagctaaagaccttgtaaatgtattacaagaagcaaatcag
actatcagcccgcaactacagacgatggcagaccgatgtggcggtggcggcggcggatgg
aacagaagccggtacggcggtgggcgcggaggcggcggcggctccttcagacgtggaacc
agtttcggcaggagcaatggccaaggaagcggcggacacaagcgatttaatgaatactaa
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