Papilio xuthus (Asian swallowtail): 106121998
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Entry
106121998 CDS
T07456
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106121998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxu03400
]
106121998
DNA repair and recombination proteins [BR:
pxu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106121998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
106121998
NCBI-ProteinID:
XP_013173294
UniProt:
A0AAJ7EDU9
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MSTLQPIQALNLDSVQQRAFIKYFNSLTEKPPTTVRIFDRNEYYSVHGADATTAAREVFC
SIANIKKMGLEPDKLDYLVLSKGNFEILIRKLLLVKRYRVEIYVCEGSSKNNEWRLEYKG
SPGNLSQLEEVLGDGLGTANENAPCLMAVNFKTDAVTKGRLLGVACVTSADYQFSISEFT
DDDLLTQLETITVQTAPAECLVVQGDNDDQKALKKVMQRANVTVTKLKRSDFSTEGLVQD
LNRLLKFKDSQSQDANAFPETRKEIAMSSLAAAIRYTTLLNENTNFGRFHLSTIQSDGFL
HLDAAALSALNVFPDLGDTSHAPTRSLYGLLDRCRTQHGKRLLAQWLRQPLRDIHLINER
LDIVQVLMERSQVRLQLHELLRRAPDLQALARRLTRKKASLHDCYRIYQAIERLPSLLQC
LAQADNATVHAALSEPISELHGDIEKFQQMIETTVDMEAIDRGEYLVKASFDEQLQSLRG
ELDRLQTAAERQLRAAADTLGLEPGKTIKLENNPQNGFYFRITNKEEHAIRGSKKFTIID
AVKGGVRFKNSALENITDEYVQTKDTYEREQDKVVAEIVNIASGYSECLFNLSHMISRVD
VLVSLAVAACSAPLPYCRPVLTDSMEELLLRDVRHPCLEVQEGVSYIPNDVHFKRGKCVM
HIITGANMGGKSTWMRSCGAAVLLAHVGCPVPASLARLPRLRALRARLGAADKEQHAHST
FMLEMLDTAAILRAATPDSLVLIDELGRGTSTYEGCGIAWAIAEKLATECKCFCLFATHY
HELTRLAALHPGVIVNSHAQASVVDGQLLLLHRIQPGAAPHSLGLHVAKLADLPDSIIQY
AEEKQSQLETNLFEIEASVKSQETSEGQEIILEFLRKCKRIHESVTSDEEMVKEIDKLKQ
ELQQHNSKYLQSLIA
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtctactttgcaacctattcaagctttgaacttagattcagtccagcaacgggcattc
atcaaatactttaactcccttacagagaaaccaccaacaacagttcgtatatttgaccgc
aatgaatactacagtgttcacggtgcagatgctacgacagccgctcgcgaggtcttctgt
tccattgctaatatcaagaagatgggcctcgaaccagataaactcgattaccttgtactc
tctaagggcaactttgaaatactcatcagaaaacttttactggtgaagcgataccgagtt
gaaatatatgtatgtgaaggttcttctaagaataatgaatggcgattagaatataaaggt
tcgcctggtaatctgtcgcaattagaggaggtgttaggtgacggtcttggaactgccaat
gaaaacgcaccatgcttgatggcggttaattttaaaacggatgccgtaacaaagggtcgt
cttctaggagtggcttgcgtgacatctgcagactatcagttctccatctcggagttcaca
gacgatgatttgctgacgcagctggagacaatcacggtgcagactgcgccggctgaatgt
ctcgtagtgcaaggcgataatgatgatcaaaaagcccttaaaaaagtaatgcaaagggca
aatgtgactgtaacaaaattaaagagatcagatttctccacggaagggctggttcaggat
ctgaatcgtttgctgaagttcaaagacagtcagtcacaggatgcgaacgcgttcccggag
acgcgcaaggaaattgccatgtccagtctagctgctgccatcagatacaccacattactg
aatgaaaacaccaactttggaaggttccatctaagcacgatccaaagtgatggtttcctg
cacctggacgcggcggcactgagcgcactcaacgtgttccctgacctgggcgacacgtcg
cacgcgcccacacgcagtctctacggactgctcgacagatgtcgcactcagcacgggaaa
cgtttgctagcacaatggctccgtcaaccgctacgtgacatccacctgatcaacgagcgg
ctggacatcgtacaggtgttgatggagaggtcgcaggtgaggctgcagctgcacgagctg
ctacgtcgcgctccagacctgcaggccctcgcacgacgcctcaccaggaagaaagccagt
ctacacgactgctacaggatctaccaggcgatagagaggctgccgtctttactacaatgt
ctagcgcaggcggacaatgcgaccgtgcacgcggcgctctcggaacctatatcggaactt
cacggtgacattgagaagttccagcagatgatcgaaactacagtcgatatggaggctata
gatagaggtgaatacttagtaaaggcatcattcgacgagcagctgcagagtctacgtggc
gagctggacaggttgcagacggcggcggagagacagttgcgtgctgctgcagacaccctg
ggcctggaaccaggcaagactatcaagctggagaataatccgcagaatggattttatttt
aggataacaaataaagaagagcacgcgattcgtggcagcaagaagttcacaataatcgat
gcggtgaaaggcggagtgagattcaagaacagcgctttggagaacatcacagatgaatac
gtgcagactaaagacacatatgaaagggaacaggacaaagttgttgccgaaattgttaac
attgcctctggatattctgaatgtttattcaacctatcgcatatgatatcccgcgttgat
gtgctggtgtcgctggcggtggcggcgtgttctgcaccgctgccgtattgccgacctgta
ctcaccgacagtatggaagaactgctgctccgtgatgtgcgccatccttgccttgaggtg
caagaaggcgtctcatatatacctaatgatgttcacttcaaacgaggtaaatgcgtgatg
catataataactggtgcgaacatgggcggcaagtcaacatggatgcggtcgtgcggcgcg
gcggtgttactggcgcacgtcgggtgtccggtgcccgcctcgctcgcccgactgccgcga
ctgcgcgctctgcgggcacgactcggcgctgctgacaaggagcagcacgcgcacagcacc
ttcatgctcgagatgctggacaccgctgctatacttagagcggcaactcccgacagtttg
gtgctgatcgacgagcttgggcgcggcacgtccacgtatgagggctgcggcatcgcctgg
gccatcgctgagaaattggcaacagaatgtaaatgtttctgtctattcgcgactcattac
cacgagctgacgcgtctggctgcgctgcacccgggtgtcatagtgaactcgcacgcgcag
gcgtccgtggtggacggacagctgctgctgctgcaccgcatccagcccggagccgcgcca
cactcactgggactgcacgtcgccaagctggctgatctgcctgactccattatacagtac
gctgaggagaagcaatctcaactggaaactaatctattcgagatcgaggcgtctgtgaaa
tctcaagaaacatcagaaggacaagaaataatattggaatttttacgtaaatgcaagcgg
atacatgagagtgtgacgtcagatgaggagatggtgaaggagatcgacaagttaaaacaa
gagcttcagcaacacaacagtaaatatttgcagtctcttattgcgtga
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