KEGG   Papilio xuthus (Asian swallowtail): 106122500
Entry
106122500         CDS       T07456                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pxu  Papilio xuthus (Asian swallowtail)
Pathway
pxu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pxu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106122500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pxu03400]
    106122500
Enzymes [BR:pxu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106122500
DNA repair and recombination proteins [BR:pxu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106122500
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase BRCT_2
Other DBs
NCBI-GeneID: 106122500
NCBI-ProteinID: XP_013173947
UniProt: A0AAJ7EED1
LinkDB
Position
Unknown
AA seq 918 aa
MGDTYTPFYVDRAKGGRASCKSCKSNCPNGELRIAKLVPSPYNENQPMKSWHHVDCFMNI
LLKQRPTTKRIDSIDDIGNWQNLSAEDQSFLLKKINETEKLFAEKHDGKYIAKVIKNESK
PLIKLNSDTFEQGDFNKSGCVQNIQDNMFSEFVHLCKRISKVDAYTEKTAVVNRFFTRGC
DGDHFKGDLPLWCKLLLPQVCKRVYNLKSKQLVKLFSRIFRMDHDDMLTHLEQGDVANTI
QYFFSKSKIVQPASDSTLTIQQVEEFLEDLSKLTREDEQIYQFKKIVKKCHLDDMTMLIR
LIKGDLRINAGPKHILEGIHPDAYQVFQTSRDLDMVLDRVLSQNDKIKHKDAIHKSMQAK
LVLMTPVLPMLAEACKSVEMAMKKCPNGMFSEIKYDGERVQVHKRGSEFKYFSRALKPVM
AHKVNHFKEYLPKAFPEGVDLVLDAEVLLVDVNTGKPLPFGTLGIHKQSAFKDAEVCLYV
FDCLYYNGDILMDLPIVKRRQILLDNMVEVKNHVMFSEQELIKKPADLAKMIAKVLQLGL
EGLVLKDLESIYEPGKRHWLKVKKDYLFDGAMADTADLVVLGAWFGTGKKGGMMSVFLMG
CLDTRRNRWVTVTKVHTGHDDPTLERLQKELAPLMVKISQEYTKLPTWLDCNKGMVPDFI
AKDPKNQPVWEITGTELTKANLHTADGISVRFPRVTRIRDDKDWKTATNLNELKELYKTS
KEKTDVSLLNKLAETANDEPPEKKFKVSPSKVSPVRVKDKKPLNGVTKIDKFLTNKGSPK
KRKSNNLNSSIENSDSSTLDDTKSSEIKFQLLPNNPLPDAFLDKKIGFYPDFISIPEDER
KYFERHWIAYGGIVVKSIKSPNVDYLVHNEDCIEFRKMQKLKNKCPSDVRHVTKNWLKKC
INNIKLCDTKYYAVTVLP
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgggtgatacgtatacaccgttttacgttgaccgagctaaaggtggtcgggcttcgtgc
aaatcctgcaagagtaactgcccaaatggtgaattgcgcattgcaaaattagttcctagt
ccttataatgaaaatcaaccgatgaaatcatggcatcatgtggattgttttatgaatata
cttttaaagcaacgccctacaacaaaacgaattgattcaatagatgatattggaaattgg
cagaacttgtctgcagaagatcaaagtttcttattgaaaaaaataaacgaaaccgaaaaa
cttttcgctgaaaaacatgacggtaaatatattgcgaaagtgataaaaaatgagtcaaaa
cccctaatcaaattgaatagtgatacatttgaacaaggtgatttcaacaaaagtggttgt
gtacaaaatattcaagacaatatgttttcggaattcgtacatttatgcaaaagaatatct
aaagtcgatgcgtatactgagaaaacagcagttgtaaacagatttttcacaagaggttgt
gacggagaccattttaaaggggatttacctctatggtgtaagttactactgcctcaagta
tgtaaaagagtatataaccttaaaagtaaacagttagttaagttattttccaggatattt
cgtatggatcatgatgatatgttgactcatttggaacagggagatgttgcaaatacaatt
cagtacttcttttctaaatctaaaattgtgcaaccggccagtgacagcacacttactatc
cagcaggttgaagaattccttgaggatctttcaaaattgacaagagaagatgaacaaata
tatcaatttaaaaaaattgtaaaaaaatgtcatctagatgacatgacaatgttaatccgt
ttaataaaaggtgatttaagaataaatgcaggaccaaaacatattctggaagggatacat
cctgatgcataccaagtatttcaaacatcaagagatttagatatggttttagaccgtgtt
ctatctcaaaatgataaaataaaacataaagatgcgatccacaagtcaatgcaagcaaaa
ctagttctcatgactccagtattacctatgttagctgaagcatgtaagtctgtagagatg
gctatgaagaaatgtccaaatggaatgttctcggaaataaaatatgatggagagagagtg
caagttcataagagaggttctgaattcaaatatttttctcgagctttaaaacccgttatg
gctcataaagtcaatcatttcaaggaatatctacctaaagcgtttcctgagggagttgac
ttagtactagatgcagaggttttgttggttgatgtgaacactggcaaacctttaccattt
ggtacattgggtatacataaacagtccgcatttaaagatgctgaagtttgtctttatgtg
tttgattgtctttattacaatggggatattttaatggatttgcctattgtaaaaagaaga
caaattcttcttgataacatggttgaagtgaaaaatcatgttatgttttccgaacaagaa
ttaataaaaaaaccagcagacttagcaaaaatgattgcaaaggttctacaactaggctta
gaaggtcttgttttaaaagacctggagtcaatatatgaacctggtaaaagacattggcta
aaagtaaagaaagattatttgtttgatggagcaatggctgataccgcagatttggttgta
cttggggcttggtttggtactggtaaaaaaggtggaatgatgtcagttttccttatgggt
tgtttagatactcgacggaatcgttgggttactgtaactaaagttcatacagggcatgat
gatcccacattggagagattacaaaaagaacttgccccgttaatggtaaaaatatcacag
gaatacacgaaacttcccacttggttagattgtaacaaaggaatggtgccagattttatc
gccaaagatccaaagaatcaacctgtttgggaaataactgggacagaattaactaaagca
aacttacatacagctgacggcatttcagtgagatttccaagagtgacaagaataagagat
gacaaagattggaaaacggcaactaatttaaatgaattgaaagaactttacaaaacgtcc
aaagaaaaaacagatgtatcattattaaataaacttgctgaaactgcaaatgatgaacct
ccggaaaagaaatttaaagtcagtccatctaaagtatcaccggttagagtaaaagataag
aaacccttaaatggtgtgacaaagattgacaaatttcttaccaataaaggttcaccgaag
aaaagaaaatctaataatttaaattcatcaatagaaaacagtgactcttccactttagat
gacacgaaatcaagtgaaataaaattccaattactaccaaataatccattaccggatgca
tttttagataaaaaaataggtttttatccagactttataagtattccggaagatgaaaga
aaatattttgaaagacattggattgcgtatggaggaattgttgttaagtcaattaaatca
ccaaatgtcgattatcttgtacataatgaagattgcattgaatttagaaaaatgcaaaaa
ttaaaaaataaatgcccgtccgatgttagacatgttactaaaaattggttaaagaaatgt
ataaataatattaaattatgtgatactaaatattatgctgttaccgttctgccttaa

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