Papilio xuthus (Asian swallowtail): 106122616
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Entry
106122616 CDS
T07456
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03022
Basal transcription factors
pxu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106122616
09124 Replication and repair
03420 Nucleotide excision repair
106122616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxu03021
]
106122616
03036 Chromosome and associated proteins [BR:
pxu03036
]
106122616
03400 DNA repair and recombination proteins [BR:
pxu03400
]
106122616
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106122616
Transcription machinery [BR:
pxu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106122616
Chromosome and associated proteins [BR:
pxu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106122616
DNA repair and recombination proteins [BR:
pxu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106122616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_11
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106122616
NCBI-ProteinID:
XP_013174150
UniProt:
A0AAJ6ZK69
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLTVDGLLVYFPYDYIYPEQYAYMLELKRALDAKGHGLLEMPSGTGKTISLLSLIVAYM
IQNPHHVRKLIYCSRTVPEIEKVLEELKNLIKYYEKSQGEKPNLTGVVLSSRKNLCIHPD
VSREREGKLVDGKCHSLTASYIRERHEGDNSVPICQFYEGFNREGKESMLPYGVYTIDDL
KQYGADRNWCPYFLSRFAIIHAEIVVYSYHYLLDPKIAEVVSKELHKEAVVVFDEAHNID
NVCVDSLSVRITRRTIDKSTAALQQLEKTVAQMREQDAARLTAEYEQLVEGLREAAVARD
TDTILGNPILPDEVLNEVVPGNIRNAEHFLGFLKRFIEYIKTRLRIQHVVQESPAGFLKD
LASRVCIDRKPLRFCASRLSSLLRALQIPDPSGFAALTLVTHLATLVATYTKGFVIIIEP
FDDKTPTVSNPIMYFSCMDSSIAMRPVFARFQSVIITSGTLSPLDMYPKILDFNPVIMSS
FTMTLARPCLLPMIVSKGSDQVAISSKYESREDVAVIRNYGQLLVEISACVPDGVVCFFT
SYLYLESVVGAWYDQGVVASLQRHKLLFIETQDSAETSFALINYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVFTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMIFADKRFSRADKRSKLPRWIQEHLRDSLCNLSTEEAVQICKRW
LRQMAQPFTREDQLGVSLLTLQQLQSQEQQDKIEKQVIQK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtagatggattattagtgtatttcccttacgattacatatacccagaa
cagtatgcatacatgcttgaattgaaacgagctcttgatgcaaagggccatggactactt
gagatgccgtcagggacaggcaaaactatatctttattatcattgattgttgcatacatg
atacaaaatccgcaccatgtcagaaagttgatatattgctcccgtactgtgccagaaata
gagaaagtattggaagagctaaagaatcttataaaatattatgaaaaaagtcaaggagag
aaacccaaccttaccggagtagttctcagttccaggaagaacttatgtatacatccagat
gtgtcaagagaaagagagggcaagttagttgatggtaaatgtcactccctcactgcaagc
tacattcgggaaagacatgaaggtgacaactctgtacctatatgtcagttctacgagggc
ttcaatagagaaggcaaggaatcaatgttgccttatggggtatacacaatagatgatttg
aagcagtacggagctgatagaaactggtgtccatacttcttgtctaggtttgctataatc
catgcagagatagttgtctattcctaccactatctgttagatccaaaaatagcggaagtt
gtatcaaaagaattacataaagaagccgttgttgtttttgatgaagctcacaacattgat
aatgtatgcgtagactcgctcagtgttaggataacgagacgcactatagataagagcacg
gctgcactacagcagctcgagaagactgttgcacaaatgagagagcaggacgcggcgcgt
ctgacggcggagtacgagcagctggtggaggggctgcgggaggcggcggtggcgcgcgac
accgacaccatactcggcaacccgatactgcctgatgaagtgctcaacgaggtggtgcca
ggcaatatcaggaacgcggagcacttccttggtttcctgaagcgcttcatagaatatatc
aagacacggctccgcatacagcatgtggtgcaggagtcacctgcaggtttcctgaaagat
ctagcatcacgggtatgcatagatcgtaagccgttacgtttctgtgcatctcgtctgtcg
tccttgctgcgcgcgctgcagatacccgacccctcggggtttgctgcactcaccctggtg
acacacctcgccacacttgtagccacatacaccaagggcttcgtcatcatcatcgaaccc
tttgatgataagactccgactgtctccaaccctataatgtatttctcttgtatggactcg
tcaatagcaatgcggcccgtgttcgcgagattccaatctgttattattacatcgggtaca
ttatcacctctggacatgtaccccaagatcctggacttcaatcctgtcatcatgagctct
tttactatgacattagctcgaccttgtctcctgcccatgatagtatcaaagggcagtgac
caggtggccatttcttctaagtacgagtcgcgagaggatgtcgccgtcatcaggaactat
ggccagctcctcgttgagatatcggcgtgtgtgcctgacggcgtggtgtgtttcttcacc
tcctacttgtacctggagagtgtcgtcggtgcctggtatgatcaaggcgtagtggcaagt
ctgcagcgacacaagctgctgttcatagagacacaggactccgcggagaccagctttgcg
ctcatcaactatatcaaggcgtgtgagagtggacgtggcgcggtgctgctgtcagtggcg
cgaggcaaggtgtccgaaggtgtggacttcgaccatcacctcggtcgcgctgtcctcatg
ttcggtataccatacgtcttcacgcagagccgcatcctcaaagcacgtctcgattacctt
cgagatcagttccagattcgcgagaatgactttttaacatttgacgcgatgcgtcacgcg
gcgcagtgtgtcggccgagctctcagaggcaaaactgactacggtataatgatatttgct
gacaagcgcttcagccgcgcggacaagcgcagcaaactgccgcgctggatacaggaacat
ctgcgcgactcactctgcaacctcagcactgaggaggctgtgcagatctgcaagcgatgg
cttcgccagatggcgcaaccgttcactcgcgaggaccagctcggcgtctccctgctgacg
ctgcagcagctgcagtcacaggagcagcaggacaagatagagaagcaggtcatacagaag
taa
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integrated database retrieval system
