Papilio xuthus (Asian swallowtail): 106123154
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Entry
106123154 CDS
T07456
Name
(RefSeq) uncharacterized protein LOC106123154 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106123154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxu03000
]
106123154
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106123154
04121 Ubiquitin system [BR:
pxu04121
]
106123154
Enzymes [BR:
pxu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106123154
Transcription factors [BR:
pxu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
106123154
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106123154
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106123154
Ubiquitin system [BR:
pxu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106123154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
TMEM252
zf-RING_2
Baculo_IE-1
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106123154
NCBI-ProteinID:
XP_013174800
UniProt:
A0AAJ6ZL98
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRKAY
PENPADFTPLSQEQVAAIKTEKKAREQKRRNKTLESRRALANVRVVQNNLVFVVGLPVRL
ADPEILKRQEYFGKYGKIHKVVINQSTAYAGSQGPSASAYVTYVTSADALRAIQGVNNVT
LDGRVLKGSLGTTKYCANFMKNQPCPKSDCMYLHELGDPNASFTKEEMHAGLHQVYERRL
HNQLLQAQRDKPDDKNCTGNSSTNAEKGSSKDGNPSNTTPTPLVTSSNINIVTTSKSKKE
TANGNGNGKEYGSNGNSKEAWPSLGSSPPADSPARKQTSPKPQHSTGKSQENGTSESSSP
TQQQIQQSHTKNNKENHTETKTNRSHKEITNGQSKKSKSEKSKQKNNSSNSNSSSNSTSS
SNSNSISQEVTEEAAESTPVYNTTENHSSVFESDAQQSYLTNELDELESDRHSLLENHDL
LDNSDHSLLDDDNTHNLLNDANNVVVMMQTHREMLAGLVDNNHILAHNMKSPLTNGYGLL
DREPVNYLGNERQISQINHGIMDQNELMLHEQRSHNEMLMRNEMLARQHNAMVEQKHYMP
TSSIGLETASELLGANFHQNHNMLPPFGMRVDSSMGSGNSISANSLSSNSVPGSSLNAMG
GYMLQHQQMLQQNQTPMPQNNLVNGFDAPQSGSEGRYLAENMDKFFTDFHKAQQMRQMLS
RDTDERRYAHAHEPRPLHSAPHYPHNMLSAERLEMEHKQRMSTIRAASGENCGGRAAGDG
DDDLDFDPFKETQKALAEMMETEMMFNTISSGDNMERVHRARIAPPPGFGHLNAFGMGVP
PHHQQHQGYNSNSAQNVFSDWTQMDPAIMSTSVSFGKQPHVQSHSQPHAQPHAQSHAQPH
SQPGLTPQQQELFARFNQLNVQPNGISKHQMSGAVSAAQQWGGGKLWGAYSMPIPPGFAP
PPASQHPAECIDAK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactgaatcaaagtggagaggagcaggtggaatgtcccctgtgtatggaacct
ctggaggtggacgatctccacttctacccgtgcacatgtggataccaaatatgccggttc
tgttggaaccgtatccgggaaggcgagaacgggctgtgtccggcgtgtcgcaaggcgtac
ccggagaacccggcagacttcactccactcagtcaagagcaggtggcggcgataaagacg
gagaaaaaggcgcgggagcagaagcggcgcaacaagacgctggagtcgcggcgcgcgctg
gccaacgtgcgcgtcgtgcagaacaacctcgtgttcgttgtcggcctgccggtgcggctc
gccgacccagagattctaaagcggcaagagtactttggcaaatatggaaaaattcacaaa
gtagttataaaccaaagtacagcatatgcaggctcacagggtccgtcggcgtctgcgtac
gtgacgtacgtgacgtcagcggacgcgctgcgtgccatccagggcgtgaacaacgtgacg
ctggacgggcgcgtgctgaagggctcgctcggcaccaccaagtactgcgccaacttcatg
aagaaccagccctgccccaagtcagactgcatgtatttacacgaactaggtgatccaaat
gcatcgttcactaaggaggagatgcacgcgggcctgcaccaggtgtacgagcggcggctg
cacaaccagctgttgcaggcgcagcgagacaagcccgacgacaagaactgcacaggtaat
tctagtacgaatgcagaaaaaggcagttcaaaagatggtaatccgtctaacacaacaccg
acaccgttggtcacatcgtcaaatataaatatagtcactacgtctaaatcgaaaaaagaa
acggcaaatggtaatggtaacggcaaggaatacggcagcaacggcaacagcaaagaggcg
tggccaagcctcggctcctcccctcccgcagacagccccgcccggaaacagaccagtcct
aaaccacagcactctacaggtaaatcacaagaaaacggcacgtcagaatcatccagtcca
acacaacaacaaatacaacagtctcatacgaaaaataataaagaaaatcacacggaaaca
aaaacgaacagatcccacaaagaaatcacaaacggccaaagcaagaagagcaaatcagaa
aaatctaaacaaaagaataacagtagcaatagcaacagcagcagcaacagtaccagcagc
agcaacagcaatagtattagtcaagaagtcacagaagaagctgcggaaagtacaccagta
tacaacaccacggaaaaccatagttcagtgtttgaaagtgatgcacaacaaagttacctg
acaaatgaattagacgaattggaatctgatagacatagcctgttagaaaaccatgattta
ttagataacagtgatcacagtctattagacgatgataacacacataaccttttaaatgat
gccaataatgtagtagtaatgatgcaaactcatagagaaatgctcgcaggcctagttgat
aataaccatatattggcacacaatatgaaatcacctttaaccaatggttacggactatta
gatagagagccggttaattatttaggtaatgaaagacaaattagccaaattaaccacgga
attatggatcagaatgaattaatgttacacgaacagaggagccacaatgagatgctcatg
agaaatgaaatgttggcccgacaacataatgcaatggttgaacagaaacattatatgcca
acttccagtataggactcgagactgctagtgaattattaggtgctaattttcatcaaaat
cacaatatgcttccaccgtttggtatgcgtgtagacagctcaatgggcagcggcaattca
atatcggctaactccttatcctccaactctgtacccgggagctcactgaacgcgatgggc
gggtacatgttgcagcaccagcagatgctgcagcagaaccagacaccaatgccacagaat
aaccttgttaatggatttgatgcgccacagtctggaagcgaaggtcggtatttagctgag
aatatggacaagttctttaccgacttccacaaggcgcagcagatgcggcagatgttgtca
cgcgacacggatgagcggcggtatgcgcacgcgcacgagccacgcccgctgcactccgcg
ccgcactacccacacaacatgcttagtgccgaacgccttgagatggaacacaagcagagg
atgagtactatacgcgcagcaagcggggaaaactgcggagggcgcgcggcgggtgacggc
gacgatgaccttgactttgaccccttcaaagaaacgcagaaggcgctcgcagagatgatg
gagacagagatgatgtttaacaccatctctagcggagacaatatggagcgtgttcaccgc
gcccggatcgcgccgccacccggattcggacacctcaacgccttcggtatgggggtcccg
ccacatcaccagcagcaccaaggttataactcgaacagcgcacagaacgtgttttcggac
tggacgcagatggaccccgcaataatgtccacctcggtcagcttcggcaagcagccccac
gtccagtcccactctcagccccacgctcaacctcacgcccagtctcatgcccaaccccac
tcccagcccggcctcacgccgcagcagcaggagctcttcgcgaggttcaaccagctcaat
gtgcaacccaacggcatctctaaacatcagatgtcaggcgcggtgtcagcggcgcagcag
tggggcggcggcaagctgtggggcgcgtacagcatgcccatcccgccgggcttcgccccg
ccgcccgcgtcgcagcaccccgccgagtgcatcgacgccaagtag
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