Papilio xuthus (Asian swallowtail): 106123446
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Entry
106123446 CDS
T07456
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03013
Nucleocytoplasmic transport
pxu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106123446
09122 Translation
03013 Nucleocytoplasmic transport
106123446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106123446
03041 Spliceosome [BR:
pxu03041
]
106123446
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106123446
Spliceosome [BR:
pxu03041
]
Complex C
Other components
EJC/TREX
106123446
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106123446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
106123446
NCBI-ProteinID:
XP_013175234
UniProt:
A0AAJ7EFF7
LinkDB
All DBs
Position
Unknown
AA seq
1416 aa
AA seq
DB search
MTTYQKFVSDYCKTWEKSGKELFIKTVTQYVKDEGKTPLFSKSGKLSGLSQIIYDLLLCG
LRGNLKKDAVVSILHDITTFHADIPSIILDVTCILDAETCTDVQSEDRTNFCYIVRELES
FISDKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYAKLIV
ELNQEITEDTEWKTLLEIIQSLIGCFNLDPNRVLDIILESFEARPHLDELFISLIKNYMV
DAQVISEVLGFKLGNMEVLENYKDPPSLMTIIALLLQHEVISLDDIYPWLRPDDTIMAKE
AEKEIKSVQDYIRKLSIVSTKGPQANGPTDFIEEKADPQEYWSNQKLVLCEALLKVTAWR
EFAALSARLPTTSMAPRPALALCAMLHALVEPLYRTHCRVAPKIIGIPVPPLKSNLAPRA
CKTFQDMKETVIPALIILGPSLHHDPVLMYKIIRILRTSRSLAEDPLHYEAITVLDTAIL
PALTLMEGNCCMAEEVYTLLKLYPYQCRYCLYSRWKNESGEKIPALMRVRGNSLQRIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYMLLQIQTYDNLIGPVVESLKYLTSLSLDVL
GYCLLEALCAGKGNIGGAAHPPWLQALAAFAGAAFKKHNIELTALLQFVANRLKAQQSQD
LLILKEIVQKMAGIEAAEEMTPDQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKDAVVG
NNLDIALCILSAQQRHCCVWKECEEEVSSGGEPAGSQLKVVGRLADQCQDALVQLGTFLA
SSHAPDEYAARLPPLQELLQDYHVDADVAFFLHRPVLAQKITAKTEALRKESDSKTESQE
QSIERYCSASKEILEPVIISITPLLPSRVWEDISPEFYVSFWSLSMYDLKVPEESYDREI
ERLKSAAATAAKDISQGAKGKKEQERFKTLIEKLQEERRRQREHTGRVSARLQRECAGWF
PARAAKSAKNETVTRLMQLCLFPRCVFTAADALYCAQFVHTVHALKTPNFSTLLCYDRLF
CDIAYSVMSCTEGEAARYGTFLCQVLATAMRWHADRAAFHRECAHYPGFVTKYRVSNQFT
EANDHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLPHFPVLGKLAQ
IIERKVEKVKEEEKTQRQDLYVLATGYSGQLRNKVPNMMRECDFHQIGDQQKVLAAAAAP
AAAVKEETAPVKQDAEASTSPQPADSDKRESRNSDKKREESDRDKETKRESRSSLKERSK
EEARSKDRSPRDRSHREERYLEAVSPPHDHRHPPDDIDRDVKRRKVESSGSGKGSKDIEE
RSPEKEKRKSKVRGDERKERKMSRKRDRAEETAILEQKRRRDEQKAVVKMGNHQNGSQED
HHYEKYHKRDKSPFRDRSHEEPRDKHRRTTESKIRR
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgactacctaccagaaatttgtgtctgactattgcaagacatgggagaaatcagggaaa
gaactgttcattaaaacggtgacacagtatgttaaagatgaaggaaaaacaccattgttt
agtaaatcaggaaagctgtcagggttgtcacaaatcatatatgatttgttgctttgtggt
ctccgtggtaatttgaaaaaggatgccgttgtatccatacttcacgatatcactacattt
catgccgacataccctcgataatcttagacgttacatgcatacttgatgcagaaacttgc
acagatgtgcagagtgaagacagaacaaacttttgttacatagtcagagaattagaatct
tttatatctgataaattacttaaggagcgacttgaaattgacactttgcaagatgttggg
acattgaaaaataaaaacttttatacgaaattcattaaaataaaaaccaagttatattat
aaacaacgtaagttcaatttgtttagagaagaaagtgaaggatatgcaaagttaattgta
gaattaaatcaggaaatcacagaagacacagaatggaaaacactactagaaatcatacaa
tctttaataggttgttttaacttggatccaaacagggttctagacataatattagaatct
tttgaggctagaccacatctagatgaattgtttatatctcttattaaaaattacatggtt
gatgcacaagtcatatcagaagttttgggttttaaactcggaaatatggaggtactagaa
aattataaggatccaccttctttaatgactataatagctttactgttgcaacatgaggtc
atctctttagatgatatttatccttggttgcgtcctgatgatacaataatggcaaaagaa
gctgaaaaggagattaaatcggtacaagactacattcgtaaattaagtattgtttcaaca
aaaggaccccaagctaatggacctactgatttcattgaagagaaggcagatcctcaggaa
tactggagtaatcagaagttagtgttatgcgaggcgttgctcaaggtgaccgcgtggcgc
gagttcgctgcactatcggcccggctgcccaccacgagcatggccccacgtcctgcatta
gctctatgtgctatgttacatgcacttgtagagccattatatagaacacattgtcgtgta
gccccgaaaataataggaataccagtccctcctttgaagtcaaacctggctcctagagcg
tgcaaaacttttcaagatatgaaggaaactgtcattccagctctaataatattagggccg
tctttacatcatgatccagttttaatgtacaaaataattcgtatattaagaacatctcgt
tcgttagcggaagacccattgcattatgaagctatcacagtactggatacggcaattctt
ccagcgctcacacttatggaaggaaattgttgtatggctgaagaagtatacactttattg
aagctatatccataccaatgcaggtattgtttatactctcgttggaaaaatgagtctggt
gagaaaataccagcactgatgcgtgttagaggtaactccttgcagagaataaaacatatt
atgaagcgtgtgtccaaggagaatataaagccacagggtcgcttgatcggcaaactgtct
catgctgcaccggctttcctctttgattacatgcttttgcagattcaaacatacgataat
ctgattggtccagtagtggaatcattaaagtacttgacgtcattatcgttggatgtgttg
ggttactgtttgctggaggcgctgtgtgcgggcaagggcaacattggaggcgccgcgcac
ccgccctggctacaagcattagctgcatttgctggagccgctttcaagaaacataacatt
gaactaacggctcttttgcagtttgttgctaacaggttaaaagctcaacaaagtcaagac
ttattgattttgaaagaaattgtacaaaagatggctggcattgaagcagctgaagagatg
acacctgaccaacttgacgccatggccggaggtgaactcttgaaaggcgaggctggctac
ttctcacaagttcgcaacacaaggaggtcgtcagcacgactcaaggacgctgtcgtaggc
aacaatttggacatcgctctgtgcatactgtcagctcaacaacgccattgctgtgtgtgg
aaagaatgcgaggaagaggtatcaagtgggggcgagccggcggggtctcagctgaaggtg
gtggggcggctggccgaccagtgccaggacgcgctggtgcagctgggcaccttcctcgca
tcctcgcacgcgcccgacgagtacgctgctcgactaccgcctttgcaggaacttcttcaa
gactatcacgtggacgcggacgtagcttttttcctacaccgaccagttttagcgcagaaa
ataaccgcgaagacagaagcactgcgtaaagaatctgacagcaaaacggagtcacaggaa
cagagcatagaaagatattgttcagcctccaaagaaattttagaaccagtaatcatatct
ataactcctcttctaccttctagagtttgggaagatatatcaccagagttctatgtatcg
ttttggtctctatctatgtacgaccttaaagttcctgaagaaagttacgaccgtgaaatt
gaacgtttaaaatcagcggcagcgaccgccgctaaagatatctctcaaggggccaagggc
aagaaggaacaagagcgttttaagacattgatagaaaaactgcaggaggagcgtcgccgt
cagcgcgagcacactgggcgcgtgtcggcgcggctgcagcgcgagtgcgcgggctggttc
cctgcgcgcgccgccaagtccgccaagaacgagacggtgacgcgcctcatgcagctctgc
ctcttcccgcgctgcgtcttcaccgccgctgacgcgctctactgcgcccagttcgtccac
accgtacatgccctcaagacgcccaacttctccaccctgctctgctacgataggctgttc
tgcgacatagcgtactcggtgatgtcgtgcacggagggcgaggcggcgcgctacggcacc
ttcctgtgccaggtgctggcgacggccatgcgctggcacgcggaccgcgccgccttccac
cgcgagtgtgcgcactatcccggcttcgtcaccaagtaccgcgtctccaaccagttcaca
gaagccaatgatcacgtcggatacgaaaactatagacatgtttgtcacaaatggcactac
aagataacaaaggcgatggtggtatgcctggactcaggggactatgttcagatacgcaat
gcgctcatcgtactcataagagtgctgccgcacttccccgttttggggaaactggcccag
atcattgagagaaaagttgaaaaggtaaaagaagaagaaaagactcaacgtcaagatctg
tacgtactcgcgacaggctacagtggtcagctgcgtaacaaagtgcccaacatgatgaga
gagtgcgatttccatcaaatcggagatcagcaaaaggtgttggctgcagcagcagcgccc
gccgcagcggtgaaggaggagaccgcgcccgtcaaacaagacgccgaagcaagcacctcc
ccgcaacccgccgattcagataaaagagagtcaaggaacagcgacaaaaagcgagaggag
tccgatcgcgataaagaaacgaaacgcgagtccagatcatccctcaaagagcgaagtaaa
gaagaagcaagaagcaaagatagatcgcccagagaccgatcacatagagaggagcgttat
ttggaagccgtgtcacctccacatgaccaccgtcatccacctgacgatatagatcgtgac
gtgaagcgtcgcaaagtagaaagcagcggctctggcaagggtagcaaagatatcgaggaa
cgttcgccagaaaaggaaaagagaaagtctaaagtaagaggagatgaacgtaaagagcgt
aagatgagtcgcaagagggatagagcagaagagacagctattttagaacaaaagaggcgt
cgggacgaacaaaaagctgtggtgaaaatgggcaaccatcaaaatggttcgcaggaggat
caccactacgaaaagtatcataaaagggataaatcgcctttccgagaccgttcccacgaa
gaacctagagataaacacaggcgaacaactgaatcgaagataagaagatag
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