Papilio xuthus (Asian swallowtail): 106124436
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Entry
106124436 CDS
T07456
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pxu01009
]
106124436
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106124436
04131 Membrane trafficking [BR:
pxu04131
]
106124436
03036 Chromosome and associated proteins [BR:
pxu03036
]
106124436
Enzymes [BR:
pxu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106124436
Protein phosphatases and associated proteins [BR:
pxu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106124436
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106124436
Membrane trafficking [BR:
pxu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106124436
Chromosome and associated proteins [BR:
pxu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
106124436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
DUF6726
Motif
Other DBs
NCBI-GeneID:
106124436
NCBI-ProteinID:
XP_013176553
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MSTPLPPQQQRRSAGESKKCTPPSNILTRNGARKAKIQTRAMSAGAKPSAVVIAAKKKNF
KKKQTIDTLLKDFYQIAMDSKLKVKGPTGLVTEPRMAEHRCLWDDNYPECPERLIEVLQR
CRELNLIEQCKQYAPRAATKEELLTLHSPSVYETLEATHQNNDIEYLEEVSSKYDAIYIH
PSTHELALLAAGSTIDMVDRIVSGEVQNGAALIRPPGHHAMRSEPCGYCFYNNVALAAKH
AIDNKGLSRILIVDWDVHHGQATQQMFYEDDRVVYFSIHRYEHGTFWPNLRQSDFNYVGE
GRGKGYNFNVPLNKTGLGDADYLAIWHQLLMPMALEYQPELIIISAGYDAAIGCPEGEMQ
VSPACYASLLHLLMCVCPALCVVLEGGYCLSSLAEGAALTLRTLLGHPPPMLMETGEPSD
SIRESILNCIYVQKPYWRCFKYQPTYHVGNVLDISGEEKQKHIVVHKWEGDETRPDKFAT
RDCYPIQDAETKRKNEDRLNHLRIVTDLSLPLHAVCYIYDEAMLKHKNICEPDHVECPER
IMRIHERLRDFGLLQRLHPLSARTAADHEILAVHTQNHLDRLKELATTKLRFLNTQKDDY
NSLYFHPDTLESAAVASGCVLQTVDAVLTKVAGAGVCVVRPPGHHADADVPSGFCLLNNA
AIAAKYAAQAHGVQRLLILDWDVHHGNGTQNITYDDNKILYMSIHRYDNGTFFPHSQEAD
YRAVGEGRGEGYNVNIPWNKRGMGNVEYMAAFTQVVLPIAYEYNPELVIVSAGFDACIND
PLGGCKVLPECYGRMTQMLKGLAGGKIILCLEGGYNIVSTSYAMTMCTKALLGDPIEFNY
NPEEEVHWSAIETINNVIKTQQKYWKSLKFQLALPIKNILDKPSPSRGLVISSPVPQKSV
SKVTSKSSNGLQSLESDMMNLTINKCTDGIHCGTDDEEDNRTDKNAGCSKSSGEGSSKSA
TDKGKKESEKQTLVDYLSENMQALVDGEMFAVVPVPWCPHLDALFAIPESVKFEQGVKCV
ECDEKNENWVCLHCYVTACGRSINGHMQAHHRATQHALVLSLLDLSVWCNVCDAYVDNPL
LYDAKNNAHKCKFGEDMPWCYKTDIHMT
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctctaccaccgcaacagcaacgtcgttctgctggtgagagtaaaaaatgt
acaccaccgtcaaatatacttacaagaaacggtgcacgaaaagcaaaaatccaaacaaga
gctatgtctgcaggtgctaagccatctgcggtagttattgctgcaaagaagaagaatttt
aagaagaaacaaactattgatacactgttaaaggacttttaccaaattgcaatggattcc
aaacttaaagtcaagggtccaactggccttgtaacggagcctcgtatggcagagcacagg
tgtctgtgggatgacaattatccagaatgtcctgaaagattgattgaagttttacagaga
tgtcgtgagttgaatttaatagagcaatgcaagcagtatgcaccaagagctgcaactaaa
gaagaacttctcaccctacactcaccgtctgtgtacgaaactctggaggctacacatcaa
aataacgatattgaatatttagaagaagtctcctcaaaatatgatgctatttatatacat
cctagtacccacgagctagcgttactcgctgctggttctactatcgacatggtagaccgt
attgtaagtggtgaggtgcagaacggtgcggcactgatccgtccgccaggtcaccatgcc
atgcgctctgagccctgcggatactgcttctacaataacgtcgcgcttgcagccaaacat
gctattgataataaaggactcagtaggattctgatagttgattgggatgtacatcacgga
caagccacacagcagatgttctatgaggacgacagggtggtatatttctctatccatcgt
tacgagcatggtacattctggccgaacctgcgtcagtctgacttcaactacgtgggcgag
ggtcgcggcaaggggtacaacttcaacgtgccgctcaacaagaccggcctgggcgacgca
gactacctcgccatatggcatcagcttctcatgcctatggctttggagtaccaaccggag
ctgataataatatctgcgggctacgacgctgccatcggctgtcctgagggtgagatgcaa
gtgagtcctgcatgctatgcgagcctgctgcacttactgatgtgcgtgtgccccgcgctg
tgcgtggtgctggagggcggctactgcctcagctcgctggctgagggcgccgcgctcaca
ctgcgcacgctgctgggacatccgccaccaatgctcatggaaactggagagcctagtgac
tcgatacgcgaatcaatattaaattgcatctacgtgcagaagccatattggcgttgcttc
aagtatcagcctacgtatcatgtaggtaacgtactggatatcagcggggaagagaaacag
aagcatatagttgtccataagtgggagggagatgaaactagacctgacaagttcgctact
agagactgctatccgatacaagacgctgagacaaagcggaagaatgaagatagattgaat
catttaaggatagtaacggacctgtcattacctctgcatgctgtgtgctacatttatgac
gaagctatgctcaagcataaaaatatctgcgagcctgatcatgtggaatgccccgagcgt
ataatgcgtatccacgagcgtctccgcgacttcgggctgctgcagcgtctgcacccgctg
agtgcccgcacagccgcagaccacgagatactggccgtgcatacacagaaccatctagat
agattaaaagagctagcgacaaccaaactacgctttctaaacacccagaaagatgattac
aactcgctgtatttccacccggatacgctggagagtgcagctgtggcttcaggctgtgtt
ttacagacggtagatgcagtgttgactaaagtggccggtgctggtgtatgcgtggtgcgt
ccgccgggacatcatgcggacgcggacgtgccgagtgggttctgtttactgaacaacgcg
gcgatagcggctaagtacgcggcgcaggcgcacggtgtccagcgactgctcatactggac
tgggatgtacatcatgggaatggcacgcagaacatcacttatgatgataataaaattctg
tacatgtcgatacatcggtatgacaacggcacgttcttccctcactcgcaggaggcggac
taccgcgctgtgggggagggcaggggggaggggtacaatgtcaacattccctggaataag
cggggtatgggtaacgtggagtacatggcggcattcacacaagtggtgctgcccatcgca
tacgaatacaatccggagctggtgattgtgtctgcagggttcgatgcttgtatcaatgat
ccactgggaggttgtaaagtgttgccagaatgctacggacggatgacacagatgctgaaa
ggattagcgggaggtaagattatcctctgcttagaaggtggatataatattgtgagcact
tcgtacgctatgacaatgtgcaccaaagccttactcggagatccaatagagtttaattac
aacccagaagaagaagtccactggtccgctattgaaactataaataacgtcatcaaaact
caacagaaatactggaagagtctcaaattccaactagccctacctataaagaatattcta
gacaaaccatcaccttccagaggcttggtcatcagtagtccagttccgcaaaagtcagtg
tcgaaagtcacttcaaaatcatccaatggtctacagtcattggaaagtgatatgatgaat
ttgaccataaacaaatgcacggatggtatacactgtggtactgatgatgaagaagataac
cgcacagataaaaatgcgggttgttccaaatcttccggtgagggtagttctaaaagtgcc
acagataaaggtaaaaaagagagtgagaaacaaacacttgtggattatttatcagagaat
atgcaggctctggtggatggggagatgtttgcagtggtgcctgtgccgtggtgcccacat
ttagatgctctgttcgctatcccagagtcggtgaagtttgaacaaggcgtcaaatgtgtg
gaatgcgatgagaagaatgagaattgggtgtgtttacactgttatgttactgcatgcggt
cgcagtataaacggtcacatgcaagcgcaccacagagcaacgcaacacgcgttagtcctc
tccctgctcgatctgtccgtgtggtgtaacgtgtgcgacgcgtacgtcgacaacccactg
ctctatgacgctaaaaacaacgcacataaatgcaaattcggcgaagatatgccctggtgt
tataaaacagatatacatatgacataa
DBGET
integrated database retrieval system
