KEGG   Papilio xuthus (Asian swallowtail): 106124581
Entry
106124581         CDS       T07456                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
pxu  Papilio xuthus (Asian swallowtail)
Pathway
pxu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106124581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxu03019]
    106124581
Messenger RNA biogenesis [BR:pxu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106124581
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     106124581
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 106124581
NCBI-ProteinID: XP_013176866
UniProt: A0AAJ6ZPL1
LinkDB
Position
Unknown
AA seq 308 aa
MAGSLISQSEQVFIVHGVENDFRSDGRSSIDYRPMELETDVVSHASGSARLRLANTDILV
GVKTEIDVPKPETPGLGKIEFFVDCSANATPEFEGRGGEQLANTISSTMQRAYYSPQAFN
LKQLCIFEGKQCWKLYVDILILECGGNLCDAVSLAVKAALFNTRLPCVKAALMDGGNIDL
QLSDDPYDSKQLDIGTAPLLVTLCKIGTKCVVDPSAEEERCSVISLVVGVTGNPNFYQTD
DNVIPDIKCKCSTISMNGPGSLSPKTLKSAIEQGITAANCLDNALGDALLREKDEISDLK
KHSYGFLK
NT seq 927 nt   +upstreamnt  +downstreamnt
atggcgggctctttaataagtcaatcagagcaagtatttatcgtacatggtgttgaaaat
gatttccgctctgatggcagatcgagtattgactatagaccaatggaactagaaacagat
gtggtgagccatgcaagtggctcggccaggctgcggcttgccaacacagatatcctagtt
ggagttaagacagaaattgatgtaccaaaaccagagactcctggccttggcaaaatagaa
ttctttgtggattgttcagctaatgcaacaccagaatttgaaggtagagggggagaacag
ttggcaaacaccatatctagtacaatgcagcgggcttactatagcccacaagctttcaac
ttaaaacagctctgtatatttgaaggaaaacagtgttggaaattgtatgttgatatttta
atacttgaatgcggaggcaacctttgtgatgcagtatctcttgcggttaaagctgcatta
tttaacaccaggttgccatgtgtaaaagcagcattaatggatggtggcaacattgattta
caattgtcagacgacccatatgacagcaagcaattagatattggaactgcacctcttttg
gtcacattatgcaaaataggaactaaatgtgttgttgatccttccgcagaagaagaacgc
tgtagtgttatatcacttgtagttggggttacaggaaatccaaacttttaccaaacggac
gataatgtaattcctgatattaaatgtaaatgtagcactatatcaatgaatggtcctgga
agtctgtcaccgaaaacacttaaaagtgccattgaacaaggaataactgctgcgaattgt
ttggataatgctcttggggacgccctcctacgtgagaaagatgagatatctgatttaaag
aaacactcgtacggttttttgaaataa

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