Papilio xuthus (Asian swallowtail): 106124694
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Entry
106124694 CDS
T07456
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106124694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106124694
03041 Spliceosome [BR:
pxu03041
]
106124694
03009 Ribosome biogenesis [BR:
pxu03009
]
106124694
03016 Transfer RNA biogenesis [BR:
pxu03016
]
106124694
Enzymes [BR:
pxu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106124694
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
106124694
Spliceosome [BR:
pxu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106124694
Complex C
U4/U6.U5 tri-SnRNP related factors
106124694
Ribosome biogenesis [BR:
pxu03009
]
Eukaryotic type
Pre-60S particles
Helicases
106124694
Transfer RNA biogenesis [BR:
pxu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
106124694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ATPase_2
DUF3379
Motif
Other DBs
NCBI-GeneID:
106124694
NCBI-ProteinID:
XP_013177064
UniProt:
A0AAJ6ZQA7
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MEQVQDLFDCFEETADDTPEISKGVLGESKEAKNSSKRPHEEVEYANTAETKRPKQDDGE
DEADLLADLDLDVLKSRIVIHTLETSDGCTHEVAIPPGHEYVPLAPISAEPAKQYSFILD
PFQKEALLCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKSKQRVIYTTPIKALSNQKYRE
FSEEFQDVGLITGDVTINSSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKE
RGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVVYTEYRPTPLQHYIF
PAGGDGIHLVVDEKGQFKEDNFNTAMAVLSNAGDAGKGEQRGRRGGVMRGNNKANIFNIV
KMVMERNFAPVIIFSFSKKDCEAYAMLMAKLDFNTIEEKKLVDEVFSNAMDILSEEDRKL
PQVEHVVPLLRRGIGIHHGGLLPILKETIEILFSLGLIKALFATETFAMGLNMPARTVVF
TNCQKFDGKDFRFITSGEYIQMSGRAGRRGLDDKGIVILMIDQKITPAVVKTTVQGKADP
INSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQASIPDLIDKVQEKQKQYDKLSLG
QEQSIAEYCGIRGQLDLLAAKFRGFITRPEYLKPFLQPGRLVKVKTEKHEYDWGIIVNFK
HNTVKGKKQKEENPLTLEQAIIVDILLHVKKWEPTDLDTKFPCPPGETGEVEVVPVLHTL
INQISSLRVYYPKDLRPPDNRKSVLKTIGEVKKRFPEGPPLLNPIKDMKIDDPVFKKCVE
NIKILEEKLYEHPIHKDENRTTLISSFEKKQEYLEELKSAKAELKKAKSILHMDELKKRK
RVLRRLGYCTTSDVIHLKGRIACELSSADELLLTELIFNGVFNSLSAEQSASLVSCFVCD
ENASQDSNTGEELRGVLRQLQEFARRIAKVSIDCNMQLDEDEYVAKFKCTLMDIVLAWCK
GATFLDICKMTDVFEGSIIRCIRRLEEVLRQLCQAAKSIGNTDLEEKFSSAITMLKRDII
FAASLYM
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagttcaagatttatttgattgctttgaagaaactgctgatgacacgcctgaa
atttcaaaaggcgtcttaggtgaatctaaagaagctaaaaattcaagtaagcgaccgcat
gaagaagttgagtacgcaaacactgcagagactaaaagaccaaaacaagacgatggagaa
gacgaggcagatctccttgctgacttagacttggatgttttaaaatctcgtatagttata
cataccttagaaacaagcgatggttgtacacatgaggtggccatacccccaggtcacgag
tatgttccattggcgcccatctctgcagaacctgctaaacaatacagttttattctggat
ccctttcaaaaagaagcgctgctgtgtatagacaacttgcaatctgttttagtgtcagcc
cacacatctgccgggaaaactgttgtagctgagtatgcaatagctctttcattaaagagt
aaacaaagggtgatatatacaaccccaatcaaggcattatcgaatcaaaaatacagggag
ttttctgaagagtttcaggatgttggattgatcactggtgatgttacaatcaactcatca
gcttcatgtctgataatgaccacagagattttaagaaacatgctgtatagaggatcagaa
ataatgagagaagttggatgggttgtgtttgacgaaattcattacatgagagataaggaa
agaggagttgtgtgggaagagacattaatcctcttgccggataatgtgcattatgtattc
ttatcagctactattcccaacgcgcgtcagtttgcagagtgggtttgcagattgcattcc
cagccctgtcatgtggtatacactgagtacagacctacaccattacagcattacatattc
cctgccggtggtgatggtatacatctcgttgttgatgagaagggtcaattcaaagaagat
aacttcaacacagcgatggctgtactaagcaatgctggggatgcgggcaaaggtgagcag
cgcggccgacgcggtggtgtcatgcgtggcaacaacaaggccaatatattcaacattgtt
aaaatggtgatggaaagaaacttcgctccagtaatcatattcagtttcagcaagaaagat
tgtgaagcttatgctatgttgatggccaaattggactttaatacgattgaagagaagaag
ttagtggacgaggtatttagtaacgcgatggacatcctgtcggaggaagaccgcaagctg
ccgcaggtggaacacgtagtgccgctgctgcgtcgcggtatcggaatccatcacggaggt
ctgctgcccatactcaaagagaccatcgagatactcttcagcttgggcctcataaaggca
ttgttcgccacggaaacatttgcgatgggtctcaacatgcccgccaggactgtggtgttc
accaactgtcagaagtttgacggaaaggactttagattcataacatcaggtgaatacatc
cagatgtcgggtcgcgcggggcggcgaggtttggacgacaagggtatcgtcatcctcatg
atagaccagaagatcacgccggcggtcgtcaaaactacagtacagggcaaagctgatcct
attaactctgccttccatctcacttataatatggtgcttaatttgttgcgagttgaagaa
ataaatccagaatatatgttagagaggagtttcttccagtttcaaaatcaagcctccatt
ccagatctcatagacaaggtacaagaaaagcaaaagcagtacgacaaattatcgttaggg
caggaacagtctatagcggagtactgtgggatacggggccagctcgacctgctggctgcc
aagttccgagggttcatcacccgtccagagtatctcaagcctttcctgcagcccggcaga
cttgtcaaggtgaaaacagagaaacatgaatatgactggggtataatagtgaatttcaaa
cataacacagtgaaaggcaagaagcagaaggaggagaaccctctgacattggagcaggcc
atcattgtggatattctactacatgtcaagaagtgggagcctacagacctagataccaag
ttcccttgtccaccaggcgagactggtgaagtggaagtagttccagttttacatacatta
ataaatcaaataagttcccttcgagtttactatccgaaagatttacgtccgcctgacaac
cgcaagtcagttctcaagacaataggcgaagtgaagaaacgtttccccgaaggacctccg
ctattgaaccctataaaagacatgaaaattgatgaccctgtattcaaaaagtgtgtggaa
aatatcaagattttagaagagaaactttacgaacatccgatacataaagatgagaatcga
accacattgatttcgtcgtttgaaaagaaacaggaatatttagaagaattaaagtcagcg
aaggcggagctgaagaaagctaagagtatattgcacatggacgaattaaagaaaaggaaa
cgagttctcagacgactgggatactgcactacgtctgatgttatacatttaaaaggtcgg
atagcctgtgaactaagtagtgcggacgaactgctgctgacggagttgatattcaacggt
gtgttcaactctctgtcggcggagcagagcgcctcgctggtgtcgtgcttcgtgtgcgat
gagaacgcctcgcaggactccaacaccggcgaggaactgcgcggagtgctgcgtcagctg
caggagttcgcgcgacgcatcgccaaggtgtcgatagactgcaacatgcagctggacgag
gacgagtacgtggccaagttcaagtgcacgttgatggatatcgtactcgcctggtgcaag
ggagccaccttcttagatatatgcaagatgactgacgtgtttgaaggatcaataataaga
tgcatacgtcgcttggaagaggtgttacgtcagttgtgtcaggccgccaagagcattggt
aatactgaccttgaagagaagttctcctcagccatcacaatgctcaaacgagatatcata
tttgcagccagtttgtacatgtaa
DBGET
integrated database retrieval system
