Papilio xuthus (Asian swallowtail): 106125894
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Entry
106125894 CDS
T07456
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106125894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxu03021
]
106125894
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106125894
Transcription machinery [BR:
pxu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106125894
RNA polymerase I system
106125894
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106125894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW7_SPT5
Spt5-NGN
KOW5_SPT5
KOW2_Spt5
KOWx_SPT5
KOW6_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
CTD
DUF3984
Motif
Other DBs
NCBI-GeneID:
106125894
NCBI-ProteinID:
XP_013178761
UniProt:
A0AAJ6ZT70
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MSDSEGSNFSGSGSDAASVVSNRSRRSAASNRSISRSRSRSRSGSRSPSRSPSRSRSRSR
SRSRSRSRSAASDASRNRDDEAKEASGDEDVEDEQEPEGEDLVDSEEYDEDEEEERRRKK
RKKDSRYGGFIIDEAEVDDEVDEDDEWEEGAQEMGIVGNEVDEIGPTAREIEGRRRGTNL
WDSQKEEEIEEYLRNKYADESAALRHFGEGGEEMSDEITQQTLLPGIKDPNLWMVKCHIG
EEKATVLLLMRKFIAYKNSEEPFQIKSVVAPEGVKGYVYIEAYKQTHVKAIINNVSALKI
GTWKQDMVPIKEMTDVLRVVKEQSGLKPKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKL
LPRIDYTRLRGALRTVQSESEAAKRKKKRRPAAKPFDPEAIRAIGGEVTSDGDFLIFEGN
RYSRKGFLYKNFTMSAILAEGVKPSLTELERFEEQPEGIDIELAAPAKDDPTSLHSFSMG
DNVEVCSGDLANLQAKIIAIDGSMITVMPKHDALKDPLVFKPNELRKYFKQGDHVKVLAG
RYEGDTGLIVRVEPHRVVLVSDLTMHELEVLPRDLQLCSDMATGVDSLGQFQWGDMVQLD
PQTVGVIVRLEKENFHVLGMQGKVIECKPQALQKRRENRFTTALDSEHNSIQKKDIVKVI
DGPHAGREGEIKHLYRNFAFLQSRMYLDNGGIFVCKTRHLQLAGGAKGAGVANALALGFM
SPRIQSPMHPSARGGGGGGRGGRGRGGRGAVARDRELLGLTIKITGGPYKGNVGIVKDAT
GSTARVELHTMCQTISVDRGHIAPAGGGARGGASSYSRTPVRMTGSHTPTYRETGIKTPM
HGSQTPIYESGARTPHYGSATPSHEGGRTPAHGVWDPTVSATPARPDFEFEESAGPAYES
SSYGQGPFTPQTPGTMYGSDHSYSPYRPSPSPAGFPAGYLGAPSPADYSPSSPAYAPATP
AAPGTPAPAPDWHTTDLEVRVTGLAEEALRGQAGVVRAVSGGACSVFLPHDDRVVTLPAA
HLAPLVPQSGDRVKVIAGEDREAVGQLISIENQEGVVKFGSDDIKIMQLRHLCKMSAA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcggaagggagtaatttttcaggcagtggctcagacgcggccagtgtcgta
tctaatagatctcgtagaagcgctgcatcaaatcgctctatatcccgatcgcggtcgcga
tcacgctctggaagtcggagtccttcccggagtccctctagatcacgctcgaggtcgcgc
tcccgttcccgatctagaagccgttccgctgcatccgatgccagtcgcaacagagatgat
gaagctaaggaagcgtcaggcgatgaagatgtcgaggatgaacaggagcctgaaggtgag
gatctggtagactctgaagaatatgatgaagatgaggaagaagaaagacgaagaaagaag
cgaaagaaggacagtcggtatggcgggttcatcattgatgaggctgaggtggatgacgaa
gttgatgaagatgatgaatgggaagagggcgctcaggaaatgggcatcgtggggaatgaa
gtggatgaaattggccccacagctcgagaaatcgagggtcgtcgccgtgggaccaatctg
tgggactcgcaaaaagaagaggagattgaagaatatttaaggaacaaatatgccgacgag
tctgctgcattgcgacactttggtgaaggtggtgaggaaatgtcagatgaaatcacccag
cagaccctcttgccgggaatcaaagatccaaacctgtggatggtgaaatgtcatattggt
gaagaaaaggcaacagttttactgctaatgagaaagtttattgcatataaaaattcagaa
gagcctttccagattaaatcagttgttgctccggaaggtgttaaaggctatgtgtacata
gaagcttacaaacaaacgcatgttaaagccattataaacaatgttagtgctttaaaaatt
ggcacgtggaaacaagacatggtgccaattaaagagatgacggatgttctgagagtggtc
aaagaacagtccggtttaaaaccaaagcaatgggtcagattaaagagaggattgtacaaa
gatgacatagctcaagtagattacgtagatctagctcaaaatcaagttcatttgaagttg
ctaccgagaatagattacacacgacttagaggtgctctgagaacagtgcagagtgaaagc
gaagcggcgaaacgaaaaaagaagcgtcgtccggccgcgaagcctttcgatccagaagcg
atccgcgctatcggtggcgaggtcacctccgacggtgacttccttatatttgagggtaat
agatattcaagaaagggctttttgtacaagaattttaccatgtcagccatcttggcggag
ggcgtcaagccatcgctaacggagttggaaagattcgaggaacaaccggagggtatcgac
atagaactggcggcgccggccaaagacgatccaacaagcttgcattcattttcgatgggc
gataacgtcgaggtgtgttccggggatctcgcaaacttacaagccaagatcatcgctata
gacgggtccatgatcacggtgatgccaaaacatgacgccctgaaagatcccctcgtgttc
aagccgaacgagctgaggaagtatttcaagcagggtgaccacgtgaaggtgttggcgggc
cgctacgagggagatacggggctcatagtcagggtggagccgcacagggtcgtgctagtg
tcggacttgaccatgcacgagctggaggtgctgcccagagatctccagctgtgctcggac
atggcgaccggcgtggattctctgggtcagttccagtggggcgacatggtccagctggat
ccgcagaccgtgggcgtcatcgtcaggctagaaaaggaaaatttccacgttctaggtatg
caaggaaaagtgatagagtgcaaacctcaagcgttgcagaaacgtcgcgagaacagattc
acgacggcgctcgactccgagcacaactctatccagaagaaggacatcgtgaaggtgata
gacggacctcacgccggccgcgagggcgagatcaagcacctgtaccgtaacttcgccttc
ctgcagtcgcgcatgtacctcgacaacggcggcatcttcgtctgcaagacgcgtcatctg
cagctggcgggcggggccaagggtgcgggcgtcgccaacgccctcgcgctcggcttcatg
tccccgcgcattcagtcccccatgcacccctcggcgcgcggcggaggcggcggcggacgc
ggggggcgaggccgcggaggccggggcgccgtcgcccgcgaccgcgagctgctcggcctc
accatcaagatcaccggcggaccctacaagggtaacgtgggcatcgtgaaggacgccacg
ggcagcaccgcgcgcgtcgagctgcacaccatgtgccagacgatctccgtggaccgcggg
cacatcgcgccggcgggcggcggcgcgcgcggcggcgcctccagctactcgcgcacgccg
gtgcgcatgaccggctcgcacacgcccacgtaccgcgagaccggcatcaagacgccgatg
cacggctcccagacgcccatctacgagtccggcgcgcgcacgccgcactacggctccgcc
acgccgtcgcacgagggcgggcgcacgccggcgcacggcgtgtgggaccccacggtgtcg
gcgacgcccgcgcgccccgacttcgagttcgaggagagcgcgggcccggcgtacgagtcg
agctcgtacgggcagggccccttcacgccgcagactccgggcaccatgtacggctccgac
cactcgtacagcccgtaccggccgagccccagcccggccggcttccccgcgggctacctg
ggcgcgcccagccccgccgattactcgcccagctcgccggcgtacgcgcccgccacgccc
gccgcgcccggcacacccgcgcccgcgcccgactggcacaccaccgacctcgaggtgcgc
gtgaccggtctggcggaggaggcgctgcgcgggcaggcgggcgtggtgcgcgcggtgtcg
ggcggcgcgtgcagcgtcttcctgccgcacgacgaccgcgtggtgacgctgcccgccgcg
cacctcgcgcccctcgtgccgcagtccggcgacagggtcaaggtgatcgcgggcgaggac
cgggaggcggtggggcagctgatctccatcgagaaccaggagggcgtcgtcaagttcggc
tctgacgacatcaagatcatgcagctgcggcacctctgcaagatgagcgccgcgtag
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integrated database retrieval system
