Papilio xuthus (Asian swallowtail): 106127136
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Entry
106127136 CDS
T07456
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106127136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxu03021
]
106127136
Enzymes [BR:
pxu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106127136
Transcription machinery [BR:
pxu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106127136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF6179
Motif
Other DBs
NCBI-GeneID:
106127136
NCBI-ProteinID:
XP_013180598
UniProt:
A0AAJ6ZWK4
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MGLNTTFTSTVPELASFDLDSVQFLMFSDEDIKKLSVLKITNPISFDSLGNATNGGLYDT
TLGPVRDRNDFCGTCSNTMLHCTGHFGHIELPLVVVNPLFIKTIYILFRISCLKCFKIQM
DDKMKSILKLQLELIEAGHVTAALDLENVVGDVKNFNSETSPDKPNKLVRRCQKLLKTKD
PINKTFQSKNTDKLRTKVINNFFKAINITKTCMYCRNKLIKVTTSDNKIMYNMTSDDTKG
IKILMPDEIKRYCSAITQNDEDLLSYCIPVLKNSNCKPASDIFFMHSVPVLPPSVRPCNV
LRGELLEHPQTNVYKSILHSSFKARAILQVLSSSDQQKAIDGLETNPRQAYESVMGKSPP
EKLHTIWQDLQKQVNYLLSCEDQTISQGLKQIIEKKTGVIRMNMMGKRVNFAARSVITPD
PNVDIDEIGIPAAFATKLTYPVPVTEWNVDELRKMVINGPNKHPGAEKIEIKNGRVIRIP
PDSIEKRKSLAKRLLTPDEYKTAGLKIVHRHLVNGDALILNRQPSLHKPSMMAHRARILK
GEKTLRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVIHQYLVPKDGTPLSGL
IQDHVISGVKMSIRGAFFTKADYQQLVFQALSKHKGEIKLLPPTILKPVMLWSGKQILST
IIINIIPKGKPYITLTGKAKISAKAWQKENPRPWNAGGTPFKDSNTMSEAEVIIRKGELL
SGVLDKTHYGATPYGLVHCMYELYGGVYSSALLSAFSKVFTFYLQWLGFTLGVRDILVTE
EANKKRDELICLVRQVGKVAAAKATDLPVDADENTLKETIGEMLTKDPKFRPNLDRQYKS
ALDSYTNKINTVCLTEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPP
LMISGRSLPSFLPYDLSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGY
LQRCLIKHLEGLAVSYDYTVRDSDGSVIQVAYGEDGLDVLKCQFLKKDQFEFLDTNSNAV
VSKSTINKLKEGESTKDIVKSQKSLKKWKKKHGNPFEKVRISPFTQFSILARKDIELDET
PTDQTRDPFYWELEKKWRSMSEEEKQEYERKKCPDPVISQYSPEYKFGVINEQLDGLIQS
YLKSRQETDNKETTDKDKFVDIMNAKYLASMAAPGEPVGLLAAQSIGEPSTQMTLNTFHF
AGRGDMNVTLGIPRLREILMTASAKLKTPNMDIPFRQNLPNLNKKAERLRQKLNRVTVAD
VLEKIDVECEIVTNPERQLKTILKFTFLPHSQYKTQYAVKPPQIIKHMKKFFPEMFSIIR
KQAKATCGVVWATEKEKKRRKANDDDEEGEEIVPEEKETIGKDVNDDSSDEEGPNDDDDN
TEVRIRKKRAEEQEYEDPESEEEEKSDDEAVPDDNQTILIDDEALEASQSEVNPDDSRVM
SDVIGSIQNATNYTYDTKSHMWCELTVLFPISFLRVDLSQALRDAAAKSVIHEVKNIKRA
ITNKEKDVLYLKTEGINILQMFKYNNVLDINKLYSNDIHAIANTYGIEAANKVIIKEIQN
VFNVYGITVDPRHLSLVADYMTYNGIFEPMSRKGMESSTSPLQQMSFESSLIFLKEAVLN
SKTDNIRSASSCLMMGQLCKSGTGAFSLQHSAFVE
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgggattaaataccacttttacttcaaccgtgcctgaactggcgtcatttgatcttgat
tcagtacaatttctcatgttcagtgatgaagatataaagaaattaagtgtgctaaaaata
acaaacccaatttcatttgactcattgggaaatgctactaatggaggtctttatgatact
actttgggccccgttagagacagaaatgatttttgtggaacttgttcaaatactatgcta
cactgcactggccattttggacatattgaactgcctttggtggttgtcaatcctttattt
atcaaaaccatttatatattattccggatcagctgcttgaagtgcttcaaaatccaaatg
gatgataaaatgaaatctatcttgaaattacaattggaattgattgaggcgggccatgtt
actgctgccttagacttagagaatgttgtgggcgatgtcaaaaattttaacagtgaaact
tctcctgataagcctaacaaacttgtaagaagatgtcaaaaactattgaaaacaaaagat
cctattaataaaacctttcaaagtaaaaatactgataagttacgaactaaagtaatcaac
aatttcttcaaagccataaacattacaaagacatgtatgtactgtagaaacaaactgatc
aaggtgactacgtctgataataaaatcatgtacaatatgacatcagatgatacgaaaggt
attaaaatattgatgcctgatgaaataaaacgttattgtagtgcgattacacaaaatgat
gaggaccttctatcatattgcataccggttttgaaaaattcaaattgtaagcccgctagt
gacatatttttcatgcattcagtgcctgttctgccaccatcagttagaccatgcaacgta
ttacgcggagaactactggaacatcctcagacaaatgtttacaaaagtatactgcattca
tcattcaaagcgagagctattttacaagtcctttcatcatccgatcaacagaaggcaatt
gatggtcttgaaacaaatccaagacaagcatatgaaagtgttatgggcaagtcacctcct
gaaaagctgcatacaatctggcaagatttacaaaaacaagtgaactacctcctcagttgt
gaggaccaaactataagtcaaggattaaaacagattattgaaaagaagaccggtgtcatt
aggatgaatatgatgggtaaaagagtcaattttgcagctcgatccgttatcactcctgat
cccaatgtagacatagatgaaattggtatacccgctgcatttgccacaaagctcacttac
cccgtacctgtgactgaatggaatgttgatgagttaagaaaaatggtaataaatggtcca
aacaaacacccaggtgcagaaaagattgaaataaaaaatggcagagttatcagaatacct
ccagactccattgaaaagagaaagagtctagctaaaagacttctaactcccgatgaatac
aaaacggcgggattaaagatagttcatagacatcttgttaatggtgatgcattaattttg
aaccgtcaaccatctctccacaaacccagtatgatggcacatcgagctaggatactcaaa
ggagaaaaaactcttaggttacattacgctaactgcaagtcttacaatgccgattttgac
ggtgatgaaatgaatgcccattttcctcagaacgaaatagctcgaagtgaggcttacaac
ataatgtcagtaattcatcagtatcttgtaccaaaagatgggaccccacttagtggatta
attcaagatcatgttatttctggagtgaaaatgtcaataagaggcgcgttttttacaaag
gcagactatcagcaattagtttttcaagctctatccaaacacaagggtgagatcaaattg
ttaccgccaacaattctcaaaccagtaatgctgtggtccggtaaacaaattttatctacc
attattataaatattatacctaaaggaaaaccatacatcacattgacaggaaaggctaag
attagtgcaaaagcatggcagaaagaaaatccacgaccctggaatgcaggtggcactcca
ttcaaagattcaaacacaatgtcagaagctgaagttatcatcagaaaaggtgaacttctg
agtggagttttagataagactcattatggtgctacaccatacggcttagtccattgtatg
tatgaattgtatggaggtgtatattccagtgctttattaagtgcattttcaaaagtattt
actttttatctgcagtggttgggatttacacttggtgtaagagacatattggttactgaa
gaagctaataaaaagcgtgacgaattgatttgcctggttcgtcaggttggcaaggtcgct
gctgctaaagcaacggatctcccagtcgatgctgatgaaaacacacttaaagaaaccatt
ggggagatgctgacaaaagatcctaaattcagacctaatttggataggcagtacaagagt
gcactggattcttatactaacaaaatcaatacagtttgtttaactgaaggtttgttggag
aaatttccctacaataatcttcaattgatggtgcagtctggagcgaaagggtcaacagta
aacactatgcaaatttcatgcttgctcggacaaattgaactggaaggaaaacgtccgcca
ttgatgatatctggacggtcgcttcccagctttttgccttatgacctctctcctagagct
gggggatttattgatggccggtttatgactggaatacaacctcaagaatttttctttcac
tgcatggcgggtcgtgaaggtcttattgatacagctgtcaaaactagtagatctggttac
ttacaaaggtgcttgataaaacatttggaaggtcttgctgtatcttatgattacactgtc
agagattcagatgggagtgttattcaggtagcttacggagaagatgggctagacgtttta
aaatgccaatttctcaagaaagatcaatttgagtttcttgacactaattcaaatgctgtg
gtttctaaatcgactattaacaaactcaaggaaggtgaaagcactaaagatattgtgaaa
tcacaaaagtccttgaagaaatggaaaaagaaacatggtaatccatttgagaaagttcga
ataagtcctttcactcagttttcaattttggcaagaaaagatattgaacttgatgagaca
cctacggaccaaacaagagatccattctattgggagctagagaaaaaatggcgatctatg
agtgaagaagagaagcaggagtacgaaaggaaaaagtgtcctgatccggttattagccaa
tattccccggagtataaatttggtgtgataaatgaacaattagatgggctgatacaaagc
tacttaaaaagcagacaagagacagataataaggaaaccacagataaagataaatttgta
gacattatgaatgctaagtatttagcatctatggcagcgccaggagagcctgtgggcttg
ttagctgcgcaatccataggagaaccttcaacacagatgacactgaatacctttcacttc
gctggaagaggtgacatgaacgttactttgggtatacctcgattaagagaaatcctaatg
acggcatccgcaaagcttaaaactcctaacatggatatacctttccgtcaaaacttgccg
aacttgaataagaaagcggaacgactcagacaaaaattgaacagggttaccgtagcagat
gttttagaaaaaatagatgttgaatgtgaaattgtcacgaatccagagcggcaactgaaa
actatattgaaattcacgtttttaccacattcacagtacaagactcagtacgcggtgaaa
cctccacagattatcaaacacatgaagaaatttttccctgaaatgtttagtattatcagg
aaacaagctaaggctacgtgcggtgtggtatgggcgactgaaaaagaaaaaaagaggcgc
aaagcaaatgatgacgacgaagaaggcgaggagattgttccagaagaaaaagaaacgatt
ggtaaagacgtgaatgatgacagctcagacgaagagggacccaacgatgatgatgacaat
accgaagtaagaataagaaaaaagagagcggaagagcaggaatacgaggaccccgagtca
gaagaagaagaaaaatcagacgacgaagctgtacccgatgacaatcaaactatattaatc
gacgatgaagctttagaagcgagtcagagtgaagtgaacccggatgatagtagagtaatg
agcgacgttatcggaagtatacaaaacgccacgaattatacatacgacacaaagtctcac
atgtggtgcgagcttactgttctattcccgataagtttcttgcgtgtcgatctttcccag
gctctacgtgatgcagccgcgaagtcggttatacatgaagtaaagaacattaaaagggct
atcacgaataaagaaaaagacgtactttacctcaagacggagggtataaacattttacaa
atgttcaaatataataatgttttagatataaacaaattgtacagcaatgatattcacgcg
atagccaacacttatggtatagaagccgccaacaaggttatcatcaaagagatccaaaat
gtgttcaatgtctatggtatcacggtggacccgagacatttgtctctggtagctgattac
atgacgtataacggaatattcgagccaatgagtcgaaaaggtatggaatcgtcgacgtcg
ccattgcagcaaatgtcttttgaatcgtctcttatattcttgaaggaagcggttctgaac
tcgaagacggacaacattcgatcggcatcgagctgccttatgatgggtcaactctgcaaa
agtggtaccggtgcgtttagcttacaacacagcgcttttgttgaataa
DBGET
integrated database retrieval system
