KEGG   Pseudobutyrivibrio xylanivorans: FXF36_00260
Entry
FXF36_00260       CDS       T06217                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pxv  Pseudobutyrivibrio xylanivorans
Pathway
pxv03030  DNA replication
pxv03430  Mismatch repair
pxv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pxv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FXF36_00260
   03430 Mismatch repair
    FXF36_00260
   03440 Homologous recombination
    FXF36_00260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pxv03032]
    FXF36_00260
   03400 DNA repair and recombination proteins [BR:pxv03400]
    FXF36_00260
Enzymes [BR:pxv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FXF36_00260
DNA replication proteins [BR:pxv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FXF36_00260
DNA repair and recombination proteins [BR:pxv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FXF36_00260
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 NTF2_6
Other DBs
NCBI-ProteinID: QFJ53414
UniProt: A0A5P6VQH4
LinkDB
Position
1:complement(54352..54891)
AA seq 179 aa
MSRFIVFDVETPNRYNNRMSAIGISVIEDDKIIDEFYSLVNPETHFDYFNVKLTGINEEK
VANAPTFPELWEQIEPIMSSGMLVAHNASFDMNVLKKCLNDYCIEWKPYARYVCTVLMGR
QLLPNISHKLNDLCCYYGIALDHHQADSDSHACAEILLRYFQDGGDIKGAIRTCSFKKK
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtctagatttattgtttttgacgtggaaactccaaatagatataacaatcgtatgagt
gctatcggaatcagcgttatcgaggatgacaaaatcatcgacgagttctactcgttagta
aatccagagactcattttgactattttaatgttaagcttacaggaattaacgaagaaaaa
gttgctaatgctccaacctttccagaactatgggaacaaattgaacctattatgagcagt
ggaatgcttgtggctcacaatgcatcttttgatatgaatgttttaaagaaatgcctaaat
gattactgtatcgaatggaagccatatgctaggtatgtctgtactgtcctaatgggaaga
caattacttcctaacatcagccataaacttaatgatttatgctgctattatggaatagcc
ctagaccaccatcaggcagatagcgatagtcacgcctgcgccgaaatacttttaagatac
tttcaagatggtggtgatataaaaggagcaattagaacctgttcttttaagaaaaaatag

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