Pseudobutyrivibrio xylanivorans: FXF36_01050
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Entry
FXF36_01050 CDS
T06217
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pxv
Pseudobutyrivibrio xylanivorans
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_01050
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FXF36_01050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_10
AAA_22
AAA_30
AAA
Hydrolase
SLFN-g3_helicase
TrwB_AAD_bind
CbiA
AAA_16
T2SSE
AAA_19
AAA_7
AAA_25
SPT2
AAA_6
nSTAND3
P-loop_TraG
HAM1_N
Prion_octapep
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QFJ53553
UniProt:
A0A5P6VLM5
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Position
1:complement(229504..231081)
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AA seq
525 aa
AA seq
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MLRDGKIWIANTESGQPVYMLPKMANRHGLIAGATGTGKTVTLKVLAESFSEMGVPVFLA
DVKGDIAGMLENGVDSENMQERIKRFGLAEHGFEYTKYPTTLWDVFGQNGIQVRTSISDM
GPLLLGRILGLNDLQNDLLTIAFKIADDNGWYLYDTKDLKAMLNELAENNKDYAAEYGNI
SKQSIGAIQRAVVALEIAGGDKFFGMPELKITDWLTTDPNGRGMIHILDSQSLINNGTLY
STFLLWMLSELFETMPEVGDLEKPKMVFFFDEAHLLFKDTPKALLDKIEQVVKLIRSKGV
GVYFVTQNPRDIPDGVLAQLGNKIQHALHAYTPSDQKAVKAAADSFRENPAFKTADVIEA
LGTGEAVASFLQEDGTPSIVEKVFILPPKSKMGGIDASVRDNAIKSSNLYSTYAVAVDPE
SAYEMLNKKNQDEAEAEAQAKADAAAAKQQAKEEAAAAKAAAREAEKEANRRKRAAKSVG
TTVAGTVGREVGKKVGKQLGGKFGQTLGGNTGAQLFRGILNTLLK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcttagagatggtaagatttggattgcgaacactgaaagtggtcagcctgtgtacatg
cttcctaaaatggcaaatcgccacggacttatagctggtgctactggaactggtaagact
gttacactgaaggttttggcagaatcattttcggagatgggggtgccggttttcctagct
gatgtaaagggtgacattgctggtatgttggaaaacggcgttgacagcgaaaatatgcag
gagcgcatcaaacgttttggtctggctgagcatggctttgaatacaccaaatacccaacc
accctttgggatgtgtttgggcagaatggtattcaggtgcgcacctccatttcagatatg
ggaccattgttgttgggaagaatcttaggcctgaatgatttgcagaatgatcttttgaca
attgctttcaagattgccgatgataatggttggtacctatacgataccaaagatttgaag
gcaatgcttaatgagttggcagagaataataaggactacgcggctgaatacggaaatatc
agtaagcagagtataggcgcaattcagcgtgcagtggttgctcttgagattgcaggcggt
gacaaattctttggtatgccagagcttaaaattaccgattggctcacaacagaccctaac
ggcagaggaatgattcatattctcgatagtcagagtcttattaacaatggaactctttat
tcaaccttccttctttggatgctttcagaattattcgaaacaatgccagaggtaggagat
ttggagaagccaaagatggtatttttctttgatgaggcgcatcttctttttaaggataca
ccgaaggctcttttggataagattgagcaggtggttaagctgattcgttctaagggagtg
ggagtttattttgtaacgcagaatcctcgtgatattcctgatggtgttttggctcagctg
ggaaacaagattcagcacgcacttcatgcatacacaccatctgaccagaaggctgtgaag
gctgcagcagattccttccgtgagaatcctgcttttaagacagcagatgtaatcgaggct
cttggaacaggtgaggctgttgcatctttccttcaggaggatggtacgccaagcattgtg
gagaaagtatttattcttccaccaaaatcaaagatgggtggaatagatgcaagtgttcgt
gacaacgcaattaaatcaagcaatctttattcgacatatgcagttgcggtagaccctgag
tctgcctatgagatgcttaataaaaagaatcaggatgaggcagaggctgaggctcaggca
aaggcagatgcagcagctgccaagcagcaggctaaggaagaagcagcggcagcaaaggcg
gcagctcgcgaagcagagaaggaggctaaccgcagaaagcgtgcagcaaaatctgtggga
accactgtggcaggaactgttggccgcgaggtaggaaagaaggtaggtaagcagcttggt
ggcaagtttggccaaactctcggtggcaacacaggagcgcaactcttccgaggtatcctt
aatacgttgttgaagtaa
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