Pseudobutyrivibrio xylanivorans: FXF36_02865
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Entry
FXF36_02865 CDS
T06217
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv03030
DNA replication
pxv03430
Mismatch repair
pxv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FXF36_02865
03430 Mismatch repair
FXF36_02865
03440 Homologous recombination
FXF36_02865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxv03032
]
FXF36_02865
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_02865
Enzymes [BR:
pxv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FXF36_02865
DNA replication proteins [BR:
pxv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FXF36_02865
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FXF36_02865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF5986
Thermopsin
MamS_MamX
Motif
Other DBs
NCBI-ProteinID:
QFJ53881
UniProt:
A0A5P6VSQ5
LinkDB
All DBs
Position
1:complement(633634..637116)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSFVHLHTHTEYSLLDGSNKIKSYVAKCKAEGMTAAAITDHGNMYGVTKFYDECMAQGVK
PVIGCEVYVAPGSRFDREMVKGDDRYYHLILLAENNVGYHNLIKIVSAGFVDGFYYKPRV
DFEILEKYHEGIICLSACLAGEVARALMRNQYDEAKAIAVKYRDLFGTDNYFLEMQDHGI
VEQKNVNQGLMRLSSETGIPLVATNDCHYTNKEDAYSHDVLLCIQTGAKMDDADRMRFET
EEFYVKTEQEMLDLFPYAKEAVYRTQEIADRCNVEIEYHIAGLPPFAVPEGYNAWTYLNK
LCFDGLKERYGDDAHLYEERLTYELNTIKEMGYIEYFLIVWDFINYARTHDIPVGPGRGS
AAGSLISYTTGITDIDPMKYNLVFERFLNPERVSMPDIDTDFDPEGREEVIDYVRRKYGD
ECVTQIVTFGTLKPKSVVQDVGRVMGLPIPYTNSIKKLIPDVLPNDEKVTIANAIKYSSE
LKAMYESDDEIRKLLDICKSLEGLPRNTGVHAAGVVISGKPTDEYMPLALGKGDVIITQY
EKEVIEEIGLLKMDFLGLRNLTVINDTIKQVEKNHGIKIDLHKIDYNDKGAMELFAAGKT
DGVFQFESAGMKNLLKQLNPTQIGDLILANAVYRPGPMDFIPNIIDCKNTGKESPFIERF
PLLRDVLQDTYGFPVYQEQVMQIMTTCAGYTMGRADNVRRMMSKKKRDKLAAERPTFVQG
CFDKNGISEEDANWLFDQLMPFAEYGFNKSHAAAYSYVAVQTAYLKKYYPLEFMAALMTS
VLNSSTKIAEYIASCREAGIELLPPDVNYGEADFAVDNGKIRYGLSAIKSVGSNTIAGII
QDRKLNGLYRDLEDFINRIVKYDANKRTIENLIKAGALDTIEGNRRQKCMVFPMILDSVN
NRKKNEIEGQMSLFDFASDEQKEDLKISMPVVEEFDEEMKLGFEKELMGVYVSGHPLGEY
MEVMNKNVTNHASEFAVDEETGKPTVQDDTEVVIGGMIMGVTTKFTKQGKAMAFITLEDV
TGSVEVIVFPNSYEQARILINDGNKVFVKGRVQVEEDKDAKLICQDIKSFDDCPQRVWIQ
LESKAGYEETEKKLAGIIKEMDGKDVLVIYFKQEKEIKVMPANWCLAATSENLAVLKEVF
GDDNVRTVAGKVEFAKSKRW
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtacatctacacacccatacggagtattcactcttggatggttccaataaa
ataaagagttatgttgcaaagtgcaaggctgagggtatgacggcagccgctatcactgat
catggaaatatgtacggtgtcacaaagttttatgacgagtgcatggcccaaggggtgaag
ccagtcataggctgtgaggtatatgttgcaccaggctctcgttttgatagagaaatggta
aaaggtgacgatagatattatcaccttattttgcttgccgaaaacaatgttggctatcac
aatcttataaagattgtttcagctggatttgttgacggattctattacaagcctcgtgta
gattttgagattttagagaaatatcatgagggaataatctgcctttctgcctgtcttgca
ggtgaggttgctcgtgcattgatgagaaatcagtacgatgaggcaaaggcaatagctgtt
aaatatagagacttgtttggaacagataattactttcttgagatgcaggaccatggcatt
gtcgaacagaagaatgttaatcaggggcttatgcgtctttcaagtgagaccggtattcca
cttgttgccacaaatgactgccactacacaaataaagaggatgcctacagtcacgacgtt
cttctttgcattcagactggtgctaaaatggacgatgcggaccgaatgcgctttgagaca
gaggagttctatgtaaagactgagcaggaaatgcttgatctttttccttatgcaaaggaa
gcagtatatcgtactcaggaaattgctgacagatgtaatgtagagattgaataccacatc
gcaggtcttccaccctttgctgtgccagagggatataatgcatggacatatcttaacaag
ctgtgttttgatggcttgaaggagcgctatggagatgatgcacatctttatgaagaacgc
ctcacctacgagctaaataccatcaaggagatgggatatattgaatacttccttattgtt
tgggatttcataaattatgcacgtacacatgatattcctgttggaccaggccgtggctct
gccgctggttcacttatcagttacactactggaatcacagacatagatccgatgaaatac
aatctggtctttgagagattccttaatccagagcgtgtatccatgcctgatatagatacc
gacttcgaccctgagggacgcgaggaggttattgactatgttcgtcgtaaatatggtgat
gagtgtgttacacagattgtcacctttggtacgttgaagccaaagagcgttgttcaggat
gtgggacgtgtaatgggacttcctattccttatacaaatagcataaagaagttgattcct
gatgtccttccgaatgatgagaaggtcaccatagcaaatgcaattaaatatagttctgaa
ctcaaggcaatgtatgaatctgatgacgaaatcagaaaacttctggatatatgtaaaagt
cttgaaggattgccacgtaacacgggtgttcatgcagctggcgttgttatttctggaaag
ccaacagatgagtatatgccacttgcactgggaaaaggtgacgtaatcataacccagtac
gaaaaggaagttatcgaagagatcggtcttttgaagatggacttccttggtcttcgaaat
cttactgttattaatgataccattaagcaggtggagaaaaaccacggcatcaaaatagat
ttacacaagatagattacaatgacaagggcgcaatggagctcttcgcggctggaaaaact
gacggcgtcttccagtttgagtctgcgggaatgaaaaatcttttgaagcagcttaatcca
actcaaattggagatttgatattggcaaatgctgtttatcgtccaggtccaatggatttc
attcctaatattattgattgtaagaatacaggaaaggaatctccattcatcgaacgattc
ccattgcttagagatgtcttacaggatacttatggtttccctgtttatcaggagcaggtt
atgcagattatgactacctgtgccggttataccatggggcgagctgacaatgtaagacga
atgatgagtaagaaaaaaagagacaagctggctgctgagcgaccaaccttcgttcaggga
tgctttgataagaatggcatttcagaggaagatgcaaactggctgtttgatcaattgatg
cctttcgctgagtatggatttaataagagccatgcggcagcctattcttacgttgccgta
cagacagcatatttaaaaaaatattatccgttggaatttatggctgctcttatgacatca
gtgcttaacagcagcacgaagattgcggaatatatagcatcctgcagagaagctggaatc
gagttgctgccacctgacgtaaattatggagaggcagattttgccgttgataatggcaag
attagatatggcctgtcagcaatcaagtctgttggaagtaacactattgctggtattatc
caggatagaaaattaaatggcttataccgtgacctagaggatttcataaatcgaatcgtt
aaatacgacgccaacaagcgcacaatcgagaacctgattaaggctggagcacttgatact
atagaggggaaccgtcgtcagaagtgcatggtatttccgatgattcttgattcagttaat
aataggaagaaaaacgaaatcgaaggtcaaatgtcactctttgactttgcaagtgatgaa
cagaaggaggacttgaagatttcaatgcccgtcgtggaagaatttgacgaggaaatgaag
ctgggctttgaaaaggaactcatgggtgtctatgtaagcggtcatccgctaggcgaatac
atggaggtcatgaataaaaatgtcacaaaccacgccagtgaatttgccgtggatgaggaa
acaggaaagcctactgttcaggatgacaccgaagtagtcattggtggaatgattatgggc
gttaccacaaagttcaccaagcagggcaaggcaatggcattcatcacactggaggatgtc
accggttcggtagaggttatcgtatttccgaattcctatgagcaggcacgtatccttata
aatgatggcaataaggtctttgttaagggccgcgtacaggttgaggaagataaggatgca
aagcttatctgtcaggatataaagagttttgatgattgcccgcagcgtgtgtggattcag
cttgaaagcaaggctggctatgaggaaacagaaaagaagctggcaggcattatcaaggaa
atggatggaaaagacgttcttgttatctatttcaagcaggaaaaggaaatcaaggttatg
ccagctaactggtgcctcgctgcgacatccgagaatcttgcagttctaaaggaagtattc
ggagatgacaatgttcgaacagtagcgggcaaggttgaatttgcaaagagcaagagatgg
tag
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integrated database retrieval system
