Pseudobutyrivibrio xylanivorans: FXF36_06500
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Entry
FXF36_06500 CDS
T06217
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv03420
Nucleotide excision repair
pxv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXF36_06500
03430 Mismatch repair
FXF36_06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_06500
Enzymes [BR:
pxv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FXF36_06500
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXF36_06500
MMR (mismatch excision repair)
Other MMR factors
FXF36_06500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Vp24_capsid
nSTAND3
Unstab_antitox
Motif
Other DBs
NCBI-ProteinID:
QFJ54525
LinkDB
All DBs
Position
1:complement(1408336..1410630)
Genome browser
AA seq
764 aa
AA seq
DB search
MNLDILNDKQREGVVTTEGPVLILAGAGSGKTRVLTHRVAYLIEQGVMPYNIMAITFTNK
AAREMRERIDSIVGFGSDGVWVATFHASCVRILRRFGDRIGYGSNFTIYDTDDCKTLMKD
VCKYLQIDTKQFKERTFLNVISDAKNKLIGPEEFTNRAMGDYNMSRQASVYREYQARLRQ
NNAMDFDDLIMKTVELLKVDGEVRAYYNDKFKYIMVDEYQDTNAAQFELVRLLTGAQQNL
CVVGDDDQSIYKFRGADIYNILNFEQHFPAAHVIKLEQNYRSTGNILEAANSVIANNEGR
KEKALWTEAEDGDKIHFQQFDSAYEEASFIASNIASFVRKGEADYKDCAVLYRTNAQSRL
IEEKMIYEGIPYKIVGGVNFYSRKEIKDILAYLKTVDNGSDDIAVQRIINIPKRGIGATT
IAKVSDFARERGLNFYEALVHCEEIPSIGKAAAKIQGFTSLVEKLREIGKTESVSALVEE
ILDQTDYVAELKAEGTDEAKARIENIDELLTKAVAYEKDARAEGEEPTLSGFLEDVALVA
DIDSYEESDNYVVLMTLHGAKGLEFPRVYMAGMEDGLFPGQSAIFDGGGADSEMEEERRL
AYVGITRAREHLTMTSARMRMIRGETAFHKISRFVKEIPEELLQGNLWEPKPMEDYSSTP
IGEYSVYQRPSKPVSSFNKPVSSYSKPASFTVGSSTTAVANKNGTKIEKGDLEYGIGDRV
SHIKFKEGTVKDIIDEGRDYEVTVEFDGVGVKKMFASFAKLRKI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatattttaaatgacaagcagcgtgagggtgttgtcacaaccgagggacct
gtgcttattttggcaggtgctggttcgggaaagacaagagtgcttacacatcgcgttgct
tatttgattgagcagggcgtgatgccatacaacattatggctatcaccttcacgaataaa
gcagctcgagagatgcgtgagcgtatagatagtatagttggatttggttcagatggcgtt
tgggttgccaccttccatgccagctgtgtgcgaatccttcgccgctttggtgacagaatt
ggatatggcagcaatttcactatttatgatactgatgattgcaagactcttatgaaggat
gtttgcaaatatcttcagatagacacaaagcagttcaaggaacgtacatttttaaatgta
atttccgatgccaagaataagctcattggacctgaggagtttaccaatcgtgccatggga
gattacaacatgtcgcgtcaggcttccgtgtaccgtgagtaccaggcacgtcttcgccag
aacaatgcaatggattttgatgacctgatcatgaagactgttgagcttttgaaggtagat
ggtgaggtgcgagcttactacaatgataagttcaagtatatcatggtggatgagtatcag
gacaccaatgctgcacagtttgagctggttcgcttgcttactggagctcagcagaatctt
tgtgtagtaggtgatgatgatcagtctatttacaagttccgtggcgctgatatctataat
attttgaattttgagcagcatttcccagcagctcatgtgattaagctggagcagaattac
cgctctaccggtaatattctggaggcagccaattctgtcatagcaaacaatgaaggacgt
aaggaaaaggccctttggaccgaagctgaggatggagataaaatccatttccagcagttt
gacagtgcatacgaggaagcaagctttattgccagcaatattgcatcctttgttcgtaag
ggagaggctgattataaggattgtgcggtgctttatcgtaccaatgcacagtcccgtctt
attgaagagaagatgatttacgagggaatcccatacaagattgtaggcggtgtaaacttc
tacagccgtaaggaaatcaaggatatcctcgcttatttaaaaacagttgataatggtagt
gatgatattgcagttcagcgtattatcaatattccaaagcgtggaatcggtgctactact
atcgccaaggtttctgattttgcaagggagcgtggtttgaatttctatgaggcgctggtt
cattgcgaggagattccttccattggaaaggccgctgcaaagattcagggcttcacgtcc
cttgttgagaagcttcgtgagattggaaagacagagtcggtttcagctcttgttgaggag
attttggatcagacagattatgtggcagagcttaaggctgagggcacagatgaggcaaag
gcacgaatcgagaatatcgacgagcttttgacaaaggcagttgcctacgagaaggatgca
agagcggaaggcgaggagccaactctttcaggatttttagaggatgttgcacttgtagcc
gatattgatagttacgaggagagcgacaactatgttgttcttatgactcttcatggagca
aagggtcttgagttcccacgtgtttacatggcaggaatggaagacggattgttcccagga
cagagtgcaatctttgatggcggtggagctgattcagagatggaagaggagcgtcgtctg
gcatacgtgggaattacccgtgccagagagcacctgactatgaccagtgctcgaatgaga
atgattcgtggtgagactgctttccacaagatttcccgatttgttaaggagattccagag
gagcttcttcagggcaacctttgggagccaaagccaatggaggattattctagcactcct
attggtgagtactctgtatatcagagaccaagcaagccagtgtctagcttcaacaagcca
gtttcaagttattcgaagccggcgagctttacagtgggaagctcgactaccgcagtggca
aacaagaatggcacaaagattgaaaaaggtgatttagaatatggtattggcgaccgcgtc
agccatattaaatttaaagaaggcacagtgaaggatatcattgacgagggtcgtgactat
gaggttacggtagagtttgatggtgtaggcgtgaagaagatgttcgcgtcgttcgcgaag
ttgcgtaagatttag
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