Pseudobutyrivibrio xylanivorans: FXF36_08145
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Entry
FXF36_08145 CDS
T06217
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxv03009
]
FXF36_08145
Enzymes [BR:
pxv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FXF36_08145
Ribosome biogenesis [BR:
pxv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FXF36_08145
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
CERK_C
Motif
Other DBs
NCBI-ProteinID:
QFJ56224
UniProt:
A0A5P6VW30
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All DBs
Position
1:complement(1784474..1785175)
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AA seq
233 aa
AA seq
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MRLDKLLVELNIGTRSEVKALLKKGLIFVDGERAAKPEQKVDENSVVITYQGKEYTYKQF
SYYVINKPKGVITATEDAHERTIMDVFYSKCPDAPRGLAPVGRLDKDTTGLLLITNDGQL
AHDMLSPKKHVDKTYFVTLDGELTNENVADLEAGVHIGEGEPTAPATVQYEGGNTCYITI
HEGKFHQVKRMFFEVGREVLELKRTAFGPLVLDEEKLPEGHFIELNRESFSCK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagacaagcttttggtagaattaaatatcggaacaaggtctgaagttaaggct
cttcttaagaagggccttatttttgtagacggagaaagggcagcaaagcctgagcaaaag
gtagatgagaactctgttgttataacttatcaggggaaggaatacacatacaaacagttt
tcttactatgttatcaacaagcctaagggagttatcaccgcaacagaggatgcacatgag
cgtactattatggatgtgttttatagcaaatgccctgatgcaccacgtggactggcacct
gtggggcgtttggacaaggataccacggggttactgttgatcaccaacgatggtcagttg
gctcatgatatgctttcgccaaagaagcatgtggataaaacttattttgtaacacttgac
ggtgaattaactaatgaaaatgtcgcagatcttgaagctggggtacatataggcgaggga
gaacctactgcacctgctactgtgcagtatgaaggtggaaatacttgctatattactatt
cacgagggcaagtttcatcaggtaaagagaatgttctttgaagtaggacgagaagtgctt
gaattaaagcgcacagccttcggtccactggtgcttgatgaagaaaaattaccagaagga
cactttattgagttaaatcgtgaaagtttttcttgcaaatag
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