Pseudobutyrivibrio xylanivorans: FXF36_08860
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Entry
FXF36_08860 CDS
T06217
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FXF36_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_08860
Enzymes [BR:
pxv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FXF36_08860
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FXF36_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
HHH_5
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SRP54
NTPase_1
T2SSE
UvrD_C
nSTAND3
NPHP3_N
AAA_12
AAA_5
AAA_28
SLFN-g3_helicase
HHH_2
AAA_24
AAA_16
TrwB_AAD_bind
CHU_C
CbiA
AAA
MeaB
AAA_29
TFIIE_alpha
TRI-like_N
Motif
Other DBs
NCBI-ProteinID:
QFJ56230
UniProt:
A0A5P6VUR6
LinkDB
All DBs
Position
1:complement(1946912..1949149)
Genome browser
AA seq
745 aa
AA seq
DB search
MEELTGYVENIIFRNADNGYTVLDFVYDEMLITCTGLFPTLGEGENLLLRGDFVDHPTYG
KQFKVASHEVVEPADELSMERYLGSGAIRGIGPKLAARIIKQFGADTFRLIEEEPERLAE
VKGISLNKAMEISDQIVGAKDIRNAMMFLDKYGLHGNTAIKIYNRFGNDIYNVIQSNPYR
LADEVAGIGFKTADEIAGQVGIKVDSEFRIKGGIQYILSQGAGMGHTYLPIEKLTEMSVE
LLRVDADSVEAQIMNLAMDKKLIIKRDEDDNKQVYSRAFYRMEESIAGMLKELNLTYKVD
KSDLEKVIRRIEKDENFQLDELQKEAVISAAERGLFILTGGPGTGKTTTITTMIHIFEEE
GYSIFLGAPTGRAAKRMSEATGYEARTIHRMLEVSGRPSEEDDVASFAKFERNEENPLEC
DVIIIDEMSMVDVSLMYALLKAITPGTRLILVGDEHQLPSVGPGNVLKDILASNQFTSVT
LEKIFRQAQESDIVMNAHKIHKGEHMELDNKSKDFFFLKRNDADTIINVMLTLVKDKMPK
YVDANISDIQVLTPTRKGLIGVERLNGILQQYLNPPSMKKNEWKGETRIFREGDKVMQIR
NDYQLEWEVKGNYNITIDKGLGVFNGDVGIIKEINDWSKSVVVEFEEGRTVSYPFASLDE
LELAYAITIHKSQGSEYPAVVMPIMEGPKMLMNRNLLYTAITRAKKCVTMVGDANVYYSM
IDNVSQAKRYSGLKARIEEAFRESI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattaacaggatatgtagaaaatataatatttagaaacgcagataatggctac
acagtgctggatttcgtatatgatgagatgctaatcacctgtacgggactgtttcctacc
ctgggagagggtgagaacctgttgttgagaggtgatttcgtggatcacccaacctatggc
aagcagttcaaggtggcaagccacgaggtggtggagccagcggatgagctttcaatggag
cgatatttaggctcaggagctataagaggtataggtccaaagttggcagcaagaatcata
aagcagtttggcgcagatacctttaggttaatcgaagaggaacctgaacgtctggcagag
gtaaagggaatctcattgaataaggctatggagatttccgaccagattgttggagctaag
gatatccgaaacgctatgatgttccttgataaatatggacttcacggcaatactgccatc
aagatatacaatcgctttggaaatgatatttataatgtcattcaaagcaatccatatagg
cttgcggatgaggtggcaggtatcggctttaaaacagccgacgagatagcaggccaggtt
ggaatcaaggtggattctgagtttagaatcaagggcggaatacagtatattctcagccag
ggtgctggaatgggacacacatatcttcctattgaaaagctgactgagatgtccgtggag
cttttgagggttgatgctgattctgtggaggctcagattatgaaccttgccatggataaa
aagctgattattaagcgtgacgaggatgacaataagcaggtttattccagagctttttat
cgaatggaagaatcaattgcaggaatgctgaaggaattgaatctgacctacaaggttgat
aaatccgacctggaaaaagtcattcgaagaatcgaaaaagatgagaatttccaattggat
gagctccaaaaggaagctgttataagtgctgcggagcgtggactcttcattcttacaggt
ggtcctggtactggaaaaactaccacaatcaccactatgattcatatttttgaggaagag
ggctacagcatctttcttggagccccaacaggccgtgctgcaaagcgaatgagtgaagca
actggctacgaggcacgtacaattcatagaatgcttgaggtttcgggcaggccaagtgaa
gaggacgatgtagcaagctttgcaaagttcgagcgaaatgaggagaatcctcttgagtgt
gatgtaattattattgatgagatgtcaatggtggatgtttctctgatgtatgctctttta
aaggccataactccagggacaaggttaattctggttggcgacgagcaccagcttccaagt
gttggccctggaaatgttttaaaggatattctggcgtcaaaccaatttacatctgtcact
ttggaaaagattttccgtcaggctcaggagagtgatattgtcatgaacgcccataagatt
cacaagggcgagcacatggagcttgataataaatcaaaggatttctttttccttaagagg
aatgatgcagacacgattatcaatgtaatgctcactctcgtaaaggataagatgcccaaa
tatgtagatgccaatattagcgatattcaggttctcacaccaacccgcaagggcttgatt
ggtgtggagcgactaaatggaattcttcagcaatatcttaaccctccatcaatgaagaaa
aatgagtggaagggtgagactagaatattccgtgagggtgataaggttatgcaaattcgc
aacgattatcagcttgagtgggaagtgaagggtaactacaacatcactattgataaagga
ttgggtgtattcaatggcgatgtgggaattattaaggagattaacgattggtccaagtcg
gttgtagttgaatttgaagagggaagaacagttagctatccgtttgccagcttagacgag
ctggagttagcctatgcaatcactattcacaagtcacagggttcggagtatccagctgtt
gtaatgcctattatggagggaccaaagatgcttatgaataggaaccttctttatactgct
attaccagagcaaaaaaatgcgtcaccatggtaggcgacgcaaatgtctattattcaatg
atagataatgtctctcaggcaaagcgctattcaggtcttaaggccagaatagaggaagcc
tttagagaatcgatttaa
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