Pseudobutyrivibrio xylanivorans: FXF36_08890
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Entry
FXF36_08890 CDS
T06217
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXF36_08890 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_08890 (uvrB)
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXF36_08890 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FXF36_08890 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
NAGLU_C
Microtub_bd
DUF87
AAA_16
MscS_porin
MrpR_N_CB
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
QFJ54966
UniProt:
A0A5P6VQS8
LinkDB
All DBs
Position
1:complement(1955834..1957822)
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AA seq
662 aa
AA seq
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MDFKLHSEYKPTGDQPQAIEALVQGFKEGNQMQTLLGVTGSGKTFTMANVIEQLNKPTLI
IAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIAKDSSINDEIDKL
RLSATASLSERRDVIIVSSVSCIYGIGEPDDFQNMMVSLRPGDMKDRDDVIHELINIQYM
RNDMDFARGTFRVRGDTLEVIPANTSDYGIRIEFFGDEIDRICETDIMTGQVKRTLEHCA
IFPASHYVIPQDKINAACASIEAELDERVKYFKSEDKLIEAQRIAERTNFDIEMLRETGF
CSGIENYSRHMTNQQPGEPPKCLIDYFGDDFLIIVDESHITLPQVRGMFAGDQARKRTLV
EYGFRLPSALDNRPLNFGEFESKLDQIMFVSATPGDYEEEHEMLRTEQVIRPTGLLDPEV
EVRPVEGQIDDLFAEIKKETANKNKVMITTLTKRMAEDLTDYLAELGVRVKYMHSDIDTM
ERAEIIRDLRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSERSLIQTIGRAA
RNSEGHVIMYADTITESMEKAISETERRREIQKAYNEAHGITPKTIQKSVRELISISKDI
AKKEMQFKKDPEEMDKQELEKLIADIQKKMQKAAAELNFEAAAEYRDKMVELKNMMIKMS
EE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaattacattctgaatacaaaccaactggtgaccagccccaggcaatagag
gcccttgtccaaggctttaaagagggcaatcagatgcagacactccttggtgttactggc
tcaggaaagactttcaccatggcaaatgtcattgagcagctgaacaaacccacacttatt
attgcccataataagactcttgctggtcagctttattcagagttcaaggaatttttccca
gagaacgcagttgaatattttgtgtcctactacgattattatcagcctgaggcctacgtg
cctagcactgatacctatatcgccaaggattcttctataaatgatgagattgataaatta
cgtctttcggctacagcatcgctttcggagcgtagggacgtaatcatcgtgtcatctgtt
tcatgtatctatggtatcggtgagccagacgatttccagaacatgatggttagtcttcgc
ccgggtgatatgaaggacagggatgatgttattcacgagcttatcaatatccagtacatg
cgaaatgacatggattttgctcgtggaaccttcagagttcgtggagatacgctagaggtt
attccagcaaacaccagtgactatggaatccgcatcgaattctttggagatgagatagat
cgtatttgtgaaacggatattatgacagggcaggtgaaacgcactttggagcattgcgcg
attttccctgccagccattatgttattcctcaggataaaattaatgcagcctgtgccagc
attgaggctgagcttgacgagcgggtgaaatacttcaaatccgaagataagctgatagag
gcgcagcgaatagctgaacgaaccaattttgatatagaaatgcttcgtgaaacaggcttc
tgttcaggaatcgaaaactatagccgtcacatgacaaatcagcagccgggagagccaccg
aagtgccttatagactattttggagatgatttcctaataattgtggatgagagccatatt
acacttcctcaggttagaggtatgtttgcaggtgatcaggccagaaagcgtacccttgtg
gagtacgggttcagactaccttcagctcttgataatcgtcctctgaattttggtgagttc
gagtcaaagcttgaccagattatgttcgtaagtgccacaccaggtgactacgaggaggag
catgagatgcttcgcaccgagcaagtcatcagacctactggactgcttgacccagaggtg
gaggttcgcccagtggagggacagattgatgatttgtttgcagagattaaaaaggaaaca
gcaaacaagaataaagtgatgataaccactcttaccaagcgaatggctgaggatttgaca
gattatcttgccgagcttggtgtgcgtgtgaaatatatgcattcggatattgataccatg
gagcgagcggagattattcgtgacctgcgtttggatgtattcgatgttcttgtcggaatc
aatcttcttcgcgagggcttggacattccagagattacattggttgcaatccttgatgcc
gataaggaaggcttccttcgaagtgagcgctcactgattcagactattggtcgtgcggct
cgaaactctgaaggtcacgttattatgtacgctgacaccataacagaatcaatggaaaag
gctatctcagaaactgagcgccgtcgtgagattcaaaaggcatataatgaggcccatggc
ataactccaaagactatccagaaatcagttcgcgagctcatttctatctccaaggatatt
gcaaagaaggaaatgcagttcaagaaggaccctgaagaaatggacaagcaggagcttgaa
aagcttattgcagatattcagaagaagatgcagaaggctgcagcagagttgaacttcgaa
gcagctgcagaatatcgtgacaagatggtagaacttaagaatatgatgataaaaatgtct
gaagagtaa
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