Pseudobutyrivibrio xylanivorans: FXF36_11805
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Entry
FXF36_11805 CDS
T06217
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv02020
Two-component system
pxv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FXF36_11805
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FXF36_11805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxv03021
]
FXF36_11805
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pxv02035
]
FXF36_11805
Transcription machinery [BR:
pxv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FXF36_11805
Bacterial motility proteins [BR:
pxv02035
]
Flagellar system
Flagellar assembly proteins
Stator
FXF36_11805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
GerE
UPF0122
Phage_terminase
HTH_28
Gpr1_Fun34_YaaH
DUF134
HTH_5
PhyR_sigma-like
Sigma70_ECF
SieB
Motif
Other DBs
NCBI-ProteinID:
QFJ55505
UniProt:
A0A5P6VS28
LinkDB
All DBs
Position
1:2622799..2623566
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AA seq
255 aa
AA seq
DB search
MKAGDREKLWDKYKVGPTPELREQLILEYAPLVKIVAGRLCMYLGNTVEYEDLCSYGIFG
LIDAIDKFDLAKDVKFETYASLRIRGSILDQIRKMDWIPRTIRQRQRMIDDAIKAVEART
GHSASDEDVASELNISSDEFLKWQSQLNVTNVVSLNEFVEAGNEPVMEAEHNSHFIQPED
NISKQELSEKLKEALDMLTEKEKQVILLYYYEDMTLKEISAALEVSESRVSQLHTKALQK
MRNVLGEYMGILTNS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggtgacagggaaaagctttgggacaaatataaagttggtcctactcccgag
cttagagaacaactaattcttgaatacgcgccgcttgttaagatagttgccggcagactc
tgcatgtatcttggtaatactgtagagtatgaggatttgtgtagttatggaatttttggt
ctgattgatgctattgataagtttgatttagcaaaggacgtaaaattcgaaacttatgca
agtcttagaattcgtggctcaattttggaccagattcgtaaaatggactggatcccacgt
actatcagacagcgtcagcgtatgattgacgatgccataaaggcagttgaggctcgcacc
ggccatagtgcttccgacgaggatgtcgcctcagagctcaatatatcatcggatgagttt
ttaaaatggcagtcacaacttaatgttacaaacgttgtttcattaaacgagtttgtagag
gctggaaatgagcctgttatggaggcggaacataattctcattttattcagcctgaggac
aatatttcaaagcaggagctttctgaaaagctcaaagaagctttggatatgcttaccgaa
aaagaaaaacaggttatccttttatactactatgaggatatgaccttaaaagaaataagt
gcagcacttgaagtttctgaatcaagagtttcccaacttcacaccaaggctctccagaaa
atgcgaaatgtcttaggcgagtacatgggaattcttacaaatagttag
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