Pseudobutyrivibrio xylanivorans: FXF36_11965
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Entry
FXF36_11965 CDS
T06217
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FXF36_11965 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxv03019
]
FXF36_11965 (rnc)
03009 Ribosome biogenesis [BR:
pxv03009
]
FXF36_11965 (rnc)
03036 Chromosome and associated proteins [BR:
pxv03036
]
FXF36_11965 (rnc)
Enzymes [BR:
pxv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FXF36_11965 (rnc)
Messenger RNA biogenesis [BR:
pxv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FXF36_11965 (rnc)
Ribosome biogenesis [BR:
pxv03009
]
Eukaryotic type
90S particles
RNase
FXF36_11965 (rnc)
Prokaryotic type
rRNA processing factors
FXF36_11965 (rnc)
Chromosome and associated proteins [BR:
pxv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FXF36_11965 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Lact_bio_phlase
Dicer_dimer
Motif
Other DBs
NCBI-ProteinID:
QFJ55534
UniProt:
A0A5P6VVK5
LinkDB
All DBs
Position
1:2654406..2655107
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AA seq
233 aa
AA seq
DB search
MKDLKEFQKTIGYEFRDESLLRQALTHSSYANEHHMKKLSDNERLEFLGDAVLEIVSSEF
LYLNYTDLNEGKLSRLRASIVCEPTLAYICKEINLGDYVLLSKGEDMTGGRTRKSILSDA
FEATIGAIFLDGGMEPASKYIHRFVLNDIEHKQLFYDSKTRLQEVVQANFKEALTYELLS
ESGPDHAKQFEVRAMVGTRVLGSGIGSTKKAAEQEAAYEGLMRLHKEDSIKII
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggatttaaaggaatttcaaaagactatcggctatgagtttagagacgaaagctta
ttacgccaggcgcttacacacagttcttacgctaatgagcatcacatgaagaagctctct
gacaatgagagacttgagtttcttggtgatgcggtgcttgaaattgtttcgagtgagttt
ttgtatctaaattacaccgatttaaatgagggtaagctttctaggcttcgtgcaagtatt
gtttgcgagcctacacttgcttacatctgtaaggagattaatcttggtgattacgttctc
ctttctaagggtgaggatatgactggtggacgtacacgtaagtctattttgtcagatgcc
tttgaggctactattggtgctatctttttggatggtggaatggagcctgcttctaaatat
attcatcgctttgttttaaatgatattgaacataagcagctgttttatgatagcaagaca
cgtttgcaagaggtcgttcaggctaattttaaggaagctcttacatatgagcttctttcg
gaatctggtcctgatcacgcaaaacagttcgaggttcgtgcaatggttggcactcgtgtc
ttaggcagtggaatcggcagcaccaaaaaggcagccgagcaggaagcggcctacgaaggt
cttatgcgcctccacaaggaagattcgattaaaatcatttaa
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