Pseudobutyrivibrio xylanivorans: FXF36_12535
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Entry
FXF36_12535 CDS
T06217
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pxv
Pseudobutyrivibrio xylanivorans
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxv03009
]
FXF36_12535 (rimO)
Enzymes [BR:
pxv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FXF36_12535 (rimO)
Ribosome biogenesis [BR:
pxv03009
]
Prokaryotic type
ribosomal protein modification factors
FXF36_12535 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QFJ55643
UniProt:
A0A5P6VSL3
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All DBs
Position
1:complement(2773153..2774481)
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AA seq
442 aa
AA seq
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MKVLFVSLGCDKNLVDSEHMLGDLMEHGYTICDDEADADIIVVNTCSFIADAMEESIQNI
IDLGAYKESGKLKALVVTGCLAQRFTDEILADLPEVDAIIGTNSYDELIPAIDEVLANKG
IKPVYKKELTGLPKDGKRMLTTGGHFAYLKIAEGCNKRCTYCIIPYIRGDYRSVPMEKLL
VEAKQLAEDGVKELILVAQETTVYGTDIYGRKALPELLNKLCEIDGIRWIRILYAYPEEI
TDELIECMASQPKICHYIDMPIQHCNDELLKKMGRKTDKADIMNIAAKLRKAMPDISLRT
TLICGFPGETEEMHQELLQFIRDMKFDRLGAFPYSQEDGTVAAKWDNQVDEDLKQKWHEE
VMLCQKEISLANNQNYIGRTLPVFIEGKLPEDGVFVGRTYRDTPSVDGFIFVNSDTELTS
GQFVEVTVNSFDEYDLIGDVKL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttttatttgtttctcttggctgcgacaagaaccttgttgactctgagcatatg
ctcggagatttaatggagcatggatatactatttgcgacgacgaggctgacgcagatatt
attgttgttaatacctgttctttcattgctgatgctatggaggaaagcattcagaacatt
attgatttgggtgcttacaaggaatctggcaagcttaaggcccttgtcgtgacaggctgc
cttgcacagcgctttacagatgaaatccttgcagatttacctgaggttgatgcaattatc
ggaacaaattcatacgatgagcttattcctgccatcgatgaggttcttgctaataagggt
atcaagccagtatacaaaaaggaacttacaggtcttccgaaggatggtaagcgtatgctt
accactggcggccattttgcatatcttaagattgcagagggctgcaacaagcgatgcaca
tactgtatcattccttatattcgtggcgattatcgttctgttcctatggaaaagcttctt
gttgaagctaagcagcttgctgaggacggtgttaaggagcttattttagttgctcaggaa
accactgtctatggaactgatatttatggtcgcaaggctcttccagagcttttgaataaa
ctttgcgaaatcgatggtatcagatggattcgtattctctatgcatatccagaagaaatc
actgatgagcttatagaatgtatggcttcacagccaaagatttgtcactacattgatatg
cctattcagcactgtaacgacgagctccttaagaaaatgggtcgcaagacagacaaggct
gatattatgaatattgctgccaagcttcgcaaggcaatgccggacatctcacttagaact
actttaatttgtggtttccctggtgagactgaagagatgcatcaggagctgctccaattt
attagagatatgaagtttgatagactcggagctttcccttattcacaagaggatggcaca
gtagctgctaaatgggataaccaggttgacgaggacttgaagcaaaaatggcatgaagag
gttatgctttgtcagaaagaaatctcactggcaaataatcagaattatatcggcagaact
cttcctgttttcattgaaggcaagctcccagaggatggagtttttgtaggtcgtacatat
cgagatacaccatcagttgatggatttatttttgttaacagtgacaccgagcttactagc
ggacagtttgttgaggttaccgttaatagctttgatgaatatgatttaataggagatgtg
aagttatga
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