Plutella xylostella (diamondback moth): 105380444
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Entry
105380444 CDS
T03915
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105380444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105380444
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
105380444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
Motif
Other DBs
NCBI-GeneID:
105380444
NCBI-ProteinID:
XP_048488100
LinkDB
All DBs
Position
30:1061817..1116141
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AA seq
728 aa
AA seq
DB search
MSAPEEKEVPIDWGNERLSRAQRAVDANVYDVDSWSLLIREAQTRSIGEVRSMYEKLITA
FPTTGRYWKIYIEQEMKQRHFERVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKE
KMAQAYDFALEKIGMDIHAYPIWNDYVTFLKSVDAVGSYAENQKISAVRKVYQRAVITPI
VGIETLWKDYIAFEQSINPIIAERMAMERSREYMNARRVSKELETVTRGLNRNMPATPPT
VDREEIKQVELWKKYISWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQAAQF
LDHSASLHKEKGDSNAARLFSDEAAAVYERATSGPLKHSTLLHFAHADYEESRLHYNKVH
QVYTRYLDMEDIEPTLAYVQYMKFARRAEGIKSARTVFKRAREDPRSHYHVFVAAALMEY
YCSKDKNIAFRIFELGLKKFPHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLSPEC
SVDIWNRFLEFESNIGDLVSIVKVERRRQAMLEKIKEFEGKETAQLVDRYKFLDLYPCSI
AELKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGNKDNDPNKDIARPDTSQMIPYK
PKINPLPGEHPIPGGTFPLPPAAAQLCACMPPPSSFRGPFVAVDMLMDLFNRIALPDKAP
APTQENGCDTKLFDLARSVHWIVDDEGITTVASKSRRRKAADDSDEDELGAAPPVNDIYR
QRQQKRVK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcccgaagaaaaagaagttcctatcgattggggtaacgagaggttaagtagg
gctcaaagggcggtggatgcgaacgtctatgatgtggactcctggtcgctgctcatcaga
gaagctcagacgaggtccatcggcgaggtccgctccatgtacgagaagctgatcacggct
ttcccgacgacagggcgatactggaagatttatattgagcaagagatgaagcagaggcac
tttgagagggtggaaaagttgttccaacggtgtctgatgaagattctcaacatagagctc
tggcggttgtacctcaactatgtgaaggagaccaaatgtatgctgcctacttacaaagag
aagatggcgcaagcttacgacttcgccctcgaaaagatcggcatggacatccacgcctac
cccatctggaacgactatgtgaccttcctgaagagtgtggacgccgtcgggtcgtacgcg
gagaaccagaagatctctgctgttaggaaggtgtaccaaagggcggtaataacacctatt
gtcggcatagaaacactatggaaagattacatagctttcgagcaaagcattaaccctatt
atagcggaacgcatggccatggagcgttcccgagagtacatgaacgccaggcgcgtgtcg
aaagaactggagactgtcacccgcggcctgaaccgcaacatgcccgccacgccgcccacc
gtcgatagggaagagatcaaacaggtggaattatggaagaaatacatttcctgggagagg
tcgaacccgctgcgatcagaagacacggctctggtcgccagaagagtcatgttcgccatt
gaacagtgtctcctgtgcctggcgcaccaccccgacgtgtggcaccaggccgcgcagttc
ctggaccactccgcctcgctgcacaaggagaagggggactcgaacgcggcgcgtctattc
tcggacgaagcggcagcagtctacgagcgagccaccagcggcccgctgaagcactccacc
ttactgcacttcgcacacgcggattatgaggagagcaggctgcattataataaggtgcac
caagtatacacccgctacctggacatggaggacatagagccgacgctggcctacgtccag
tacatgaagttcgcgcgccgcgccgaggggatcaagtccgcgaggactgtcttcaagcga
gccagggaggacccgagatcacactaccacgtgttcgtagccgcagctctcatggagtac
tactgttctaaagacaagaacatcgccttcaggatattcgagctcgggctgaagaagttc
ccgcacataccggagtacgtgctgtgttatatcgactacctgtcgcatttgaacgaggat
aacaacactcgcgtgctgttcgagcgagtgctgtcgtcgggcagcctcagccccgagtgc
tccgtggacatctggaacaggttcctggagttcgagtccaacatcggggacctggtgtcc
atcgtgaaggtggagcgtcggcggcaggccatgctcgagaagatcaaagagttcgagggc
aaggagacggcgcagctggtggaccgctacaagttcctggacctgtacccctgcagcatc
gccgagctcaagtccatcggctacacggaggtggcgtcaatgtcgaataaatcttgggct
ctcgggggtccgttggcgggtatttcacccgaactagcagctgttattctaggaaataaa
gataacgacccaaacaaggacatagcccgcccggacacgagccagatgatcccgtacaag
cccaagatcaacccgctgcccggcgagcaccccataccaggaggcaccttccccctgccc
cccgccgccgctcagctgtgcgcgtgcatgccgccgccctcctccttccgaggacccttc
gtggccgtggacatgctgatggacctgttcaataggatcgcactgccggataaggctccc
gcccccactcaagagaacggttgtgacaccaagctcttcgacctggcgcggtccgtgcac
tggatagtggatgatgagggcatcaccaccgtcgctagcaagtcccggcggcggaaggca
gccgatgactccgacgaagacgagctcggcgcagccccgcccgtcaacgacatctaccgg
cagcggcagcagaagagagtcaagtag
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