KEGG   Plutella xylostella (diamondback moth): 105380555
Entry
105380555         CDS       T03915                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
pxy  Plutella xylostella (diamondback moth)
Pathway
pxy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pxy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105380555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pxy03041]
    105380555
Spliceosome [BR:pxy03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105380555
 Complex C
   U5 SnRNP specific factors
    105380555
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_SCAP WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st eIF2A Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Vps41 Ge1_WD40 WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Cytochrom_D1 DA_C PEP5_VPS11_N Beta-prop_IFT122_2nd GATase
Other DBs
NCBI-GeneID: 105380555
NCBI-ProteinID: XP_037972844
LinkDB
Position
3:10745327..10748489
AA seq 349 aa
MPEMETKRKADDYSVVPAKKTRHEISVVGTREKAVVTSAVPRTSNLHAPIMLLEGHQGEI
FTAQFHPEGKHIASAGFDRQIFIWNVYGQCENIMVMKGHTGAIMELCFSPDGGHISTAST
DNTLAVWDLPTGTRIKKLKGHTNFVNSVSGARRGPELLVSGSDDGSVKLWDVRQRNPAAS
LDATYPVTAVLFNDTAEKVISGGIDNVIKVWDIRNKEISYKVKGHTDTVTGLALSEDGSY
LLSNAMDSTLRIWDVRPFAPAERCVKLLSGHQHNYERDLLRCAWARDGSKVSAGSADRHV
WVWCTTSRRALLRLPGHRGAVTAVAFHPREPVLLSASSDKTLYLGEIQN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgccagaaatggagacaaaacggaaggcggacgactattcagttgttcctgcaaagaag
actcgtcatgaaatctccgtcgtcggcacaagagaaaaagcggtggtaacctctgcggtg
ccgcgaacgtccaacctgcacgcgcccatcatgctgctggaggggcaccagggggagatc
ttcaccgcgcagttccaccccgaggggaagcacatcgcctccgccggcttcgacagacaa
atatttatatggaatgtgtatgggcagtgcgagaacataatggtgatgaagggccacacg
ggcgccatcatggagctgtgcttctccccggacgggggccacattagcaccgcctccacc
gacaacacactcgctgtgtgggacctgcccaccggcacgcgcattaagaaactcaaggga
cacaccaacttcgtcaactctgtctcaggcgcgcggcgcgggccggagctgctggtgtcg
ggctcggacgacggctccgtgaagctgtgggacgtgcgtcagcgcaaccccgccgcctcg
ctggacgccacctaccccgtcaccgccgtgctcttcaacgacaccgcggagaaagtcatc
tccggcggcatcgacaacgtcatcaaggtctgggacatcaggaataaggagatttcatat
aaagtcaaaggacacacggatactgttacagggctggcgctgtcggaggacgggtcgtac
ctgctgtcgaacgcgatggacagcacgctgcgcatctgggacgtgcgtccgttcgcgccg
gccgagcgctgcgtgaagctgctgtcgggccatcagcacaactacgagcgcgacctgctg
cgctgcgcctgggcaagagacggctccaaggtgtcggcgggctcggcggaccggcacgtg
tgggtgtggtgcacgacgtcgcggcgcgcgctgctgcggctgccgggccaccgcggcgcc
gtcacggccgtggccttccacccgcgcgagcccgtgctgctctccgcctccagcgacaag
acgctctatctgggcgagatacagaactag

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