Plutella xylostella (diamondback moth): 105381915
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Entry
105381915 CDS
T03915
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03008
Ribosome biogenesis in eukaryotes
pxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105381915
09123 Folding, sorting and degradation
03018 RNA degradation
105381915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxy03021
]
105381915
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105381915
03009 Ribosome biogenesis [BR:
pxy03009
]
105381915
03016 Transfer RNA biogenesis [BR:
pxy03016
]
105381915
Transcription machinery [BR:
pxy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105381915
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
105381915
Ribosome biogenesis [BR:
pxy03009
]
Eukaryotic type
Pre-60S particles
RNases
105381915
Transfer RNA biogenesis [BR:
pxy03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
105381915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
105381915
NCBI-ProteinID:
XP_048486184
LinkDB
All DBs
Position
25:728046..750334
Genome browser
AA seq
965 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIVECIEQRPVDVDGQQVPVDSSLPNPNGVEFDNLYLDMNGIIH
PCTHPEDKPAPKDEDEMMIAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKETQEKIDEIARIRSELQAKGAYLPPEKPKEAHFDSNCITPGTPFMDRLSKCLHYYIH
DRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPEDNMAKDPNMAFGNQDSF
IFVRLSVLREYLERELQMPNLPFPYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD
RLVNLYKKCVYKTRGWLTDSGDVNLERVQVIMSELGLAEDEIFKRRQQNEINFKNREKAK
KRREQQQRPNFNLLERTQFAPTPIGQGPQTVQNARQEAANIRLAGMNRDSAPDNSNNRKR
SAGAAGLDEEEDEQKHDEVRLWEDGFKERYYESKFEVSQDNLEFRYRVALQYVRGLCWVL
RYYYQGCASWKWYFPYHYAPFASDFVNIGGLATAFETGTEPFRPLEQLMGVFPAASSTHV
PKPWAKLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVEENRLFKALEPYYGELT
AAERQRNIRGNDRLYVDPSNPAYQFLLGLYSGAGGELRGRAGGEQQYPLRSEGVRGQLML
ASENVPVNGQLNSPVVGLPPVLGNQVVCVRFVDPEYPEDFIFPARRLPGATEPLRVLKPG
DLSQQGNRNWRPQIGMVPSNTLASLEAAGHRMLGHHLPRDRSYSHVPPPQQHQNQHNRDR
SQSYGPQRSGYVPYQNQRHQGDQGYNQGNQGYNQGNQGYNQGRQGYNQGGQSYNQGGHGY
NQGGQSYNRGGQDNRGSQDNRGSRHNQGGFRHQSPNDRNQGYRNNQGYSSNGSHGYSSQG
GSRWR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagccttctttcgttggctcagccgaaaatatccaagcgtcattgtagaa
tgtattgaacagaggccagtcgacgtggatggccagcaggtgcccgtggattcctcttta
ccgaatccaaatggggtagaatttgataatttatatttggacatgaatggtattatccac
ccctgcacgcatcctgaggacaagccggctcccaaggatgaggacgagatgatgattgcc
atcttcgagtgcatcgaccgcctgttcaggatcgtgaggccgaggaaactgctctacatg
gccattgatggagtggcaccgagggcaaagatgaaccagcagcgctcccgtcgtttccgt
gcctccaaggagacccaggagaagattgacgagattgcccgcatcaggtccgagctgcag
gccaagggtgcctacctgccccccgagaagcctaaagaggctcacttcgactccaactgc
attactcccgggactccgttcatggaccgacttagcaaatgcttgcattactatattcat
gatagactcaacaatgaccctggctggaagggtgtgaaggtgatcctatcggacgccaac
gtgcccggcgagggcgagcacaagatcatggattatatccgcaggcagagagcgcaaccg
gaccacgacccgaacacgcagcacgtgctgtgcggcgccgacgcggacctcatcatgctg
gggctggcgacccacgagcccaacttcaccatcattagggaggagtttaagccgaacaag
ccaaggccttgcgatgtttgtgggcaactgggccatgagatgaaggaatgcaccggcaca
acccctgaagacaacatggccaaagaccccaacatggccttcggaaaccaagacagcttt
atcttcgttcgcctgagcgtcctcagagaataccttgagagggaactacagatgcccaac
ttacctttcccctatgacttcgagagggcgctggacgactgggtgttcatgtgtttcttc
gtcggcaatgacttcctgccgcatctgcccagtctggagatcagggagggagccgtggat
cgattggtcaatctgtataagaagtgcgtttataagacgcggggctggcttacggactct
ggtgatgtgaacctggagcgcgtgcaggtgatcatgtcggagctggggctggctgaggac
gagatcttcaagcggaggcagcagaacgagatcaactttaagaaccgcgagaaagctaag
aagcggcgggaacagcagcagcggcccaacttcaaccttctagagaggacgcagttcgcc
cccacgccgatcggccagggtccgcaaacagtgcagaacgcccggcaagaagccgccaac
attcgtctagctggcatgaacagagactcggcgccggacaactccaacaaccgcaagcgc
tcggccggggcggccgggctggacgaagaagaagatgagcagaagcacgacgaggtgcgg
ctgtgggaggacggcttcaaggagagatactacgagagcaagttcgaggtgtcccaggat
aacctcgagttcaggtaccgagtggccctgcagtacgtgcgcgggctgtgctgggtgctg
cgctactactaccagggctgcgccagctggaagtggtacttcccgtaccactacgcgccg
ttcgcgtccgactttgtgaatattggcggtttagctacggccttcgagactgggactgag
cctttccgtccgctggagcagctgatgggcgtgttcccggccgccagctccacgcacgtg
cccaagccctgggccaagctcatgagcgatcccttctcgccgatcatcgacttctacccc
acggacttcaagatcgacctgaacggcaagaagttcgcgtggcagggggtggcgctgctg
ccgtttgtcgaggaaaataggctgtttaaggctctcgagccgtattatggcgagctgact
gctgctgagagacaacgcaacatccgcggcaacgaccgtctctacgtcgacccttccaac
ccggcgtaccagttcctactaggcctgtactcgggggcgggcggcgagctgcgggggcgg
gcgggcggcgagcagcagtacccgctgcggagcgagggcgtgcgcgggcagctcatgctg
gccagcgagaatgtacctgtcaatggacaactcaactccccagtcgtcgggctgccccca
gtgctcggcaaccaagttgtctgcgtgcgcttcgtggatcccgagtaccctgaggacttc
atcttcccggcgcggcggctgcccggggctacggagccactgcgagtgttgaagccaggg
gatctgagccagcaggggaacaggaactggaggccgcagattggcatggttccctccaac
acgctggcgtctctagaagcggctggacatcgcatgctgggccaccatctgcctcgcgac
cgctcctactcgcacgtgccgccgccgcagcagcaccagaaccaacataatcgcgatcgg
tctcaaagctacggaccccagcgaagcgggtacgtcccctaccagaaccagaggcatcaa
ggtgaccagggctacaaccaaggcaaccaaggatacaaccaaggcaaccaaggatacaac
caaggccgccaaggctacaaccagggaggtcaaagctataaccaagggggtcacggctat
aatcaaggaggtcaaagttataaccgaggtggccaagacaacagaggtagccaagacaac
agagggtcaaggcataaccagggaggcttcagacaccagtctcctaacgacaggaaccaa
ggatacaggaataaccaaggatacagcagcaacggtagccacgggtatagcagtcagggt
ggcagcaggtggcgttga
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