Plutella xylostella (diamondback moth): 105383955
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Entry
105383955 CDS
T03915
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105383955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxy03400
]
105383955
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105383955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
105383955
NCBI-ProteinID:
XP_048477916
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Position
7:complement(5697212..5723069)
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AA seq
1122 aa
AA seq
DB search
MSKRNSSGASNTLFNYFSKTPPAGKKSRPAAGNNASPALDSSLNNGKDLKVETKKRERQS
TSPQREEDSDDDVPVATKRRKRIRLNPIDSDDSDTENKADNTISTPKEKEKVSLESKLSD
SFKYEPNQTPKGSKDTAKSVGSRPSSTPSKPAKPDPEPIASDEGNWVHCKLDWLKPAKIR
DAEKRRPDHPDYDARTLYVPPEFLKAQTPAHRQWWEMKSSHFDCVLFFKVGKFYELYHMD
AAVGVSELGFSYMKGEFAHSGFPESAYARMNATLVSKGYKVARVEQTETPEMMQERCRKS
GAKQKVVTREICNVSLRGTQVCGLQDNGPSSSTANYMITVAEEESHGRSSYGVCFIDTSL
GQFRLGQFSDDKHSSRLLTTLAHHPPALVIYDRKSTSPRTVNLLTTHCPSARREALPLWA
PEKTLKVLAEKYYKTNVDGDWPDGIREFLHDGDALGLTPANNCYLAIKALGGCVSYLTDC
LLDIQILEMGQFTSYSPPDVLNKTLSQETKVENRWEGGNTMVLDAITLRNLRIVQDEGCL
YDKLNYCSTPFGKRLLYQWVCSPSANMAEISERQGAVRALFHNNELSQEAQAVLAPLPDL
ERLLAKVHALGNLKRSKHHPDARAIFYEEKTYTKRKVLDFIAVLNGFTAVMKLLDLFENT
DSEMLNRLTRLPPHGKFPDYREELAFFKQSFNHAEAEKEGRMLPGAGIDSEYDDSLREID
SIQAELQEYLKEQEKFFRCRVTFVGTDKKRFQLEVASGAAARATSHYQLEGTRKGYSKFS
TAETKELLARMMAAEEQKATVLKDFSRRIFEKFSQKYSLWEAAVKRVAVLDVLLSLAQFA
RQQSGDVCLPEVTFEPDVKPFIQITEGRHPCIPVNDFIPNDTELGVEETSLMLLTGPNMG
GKSTLMRQVGLLTVLAHLGSYVPAQHCRLSAVDRIFTRLGANDDILSGQSTFLVEMNETA
AIVAHATEHSLVLLDELGRGTSTYDGTAIASGVCAELAARRCRCVFSTHYHSLVRHLARH
PRVLLRHMACMVETDETTADNEDEIPEETITFLYKLAPGACPKSYGFNAARLAGIPREIT
RRAQQISRNLEKEATCVRAFRDIMKMGSNAKELRDLLGKLSI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgaaatagttctggcgcatctaatacactattcaactatttctctaaaact
ccgccggccggcaagaaatcgagacccgcagcgggaaacaatgctagcccagccctcgat
tcctctttgaacaatggaaaagatctcaaagtggaaactaaaaaacgggaaaggcagtcc
acttctccacaaagagaagaagacagtgatgatgatgtccccgtggccaccaagaggagg
aaaaggatcagactcaaccccattgattctgatgattcagacacagaaaataaagcagac
aacactatcagtacaccaaaggagaaagaaaaggtctctttggaatcaaagctgagtgac
agctttaagtatgaaccaaatcaaactccaaaagggagcaaagatacagccaagagtgtt
ggaagcagaccatcatcaacaccatcaaagccggctaaaccggaccctgagccaatagca
tcagatgaagggaactgggtgcactgcaagctggactggctgaagccggcgaagatccga
gatgctgagaagaggagacccgaccaccccgactatgatgctcgcaccctctatgtgcca
cctgagtttctgaaggctcagacacctgcccaccgtcagtggtgggagatgaagtcgtcc
cacttcgactgcgtgctgttcttcaaggtgggcaagttctacgagctgtaccacatggat
gcggccgtgggggtctctgagctagggttctcatatatgaagggagagtttgcccactcc
ggtttccctgagagcgcgtacgcgagaatgaacgctacgctcgtgtccaaagggtacaaa
gtcgcccgcgtcgagcagacggaaacaccggaaatgatgcaagagaggtgtagaaagtcg
ggcgcgaaacagaaggtggtgacccgagagatctgcaacgtgagtctgcgtgggacacaa
gtgtgtggtctacaggacaacgggcctagttcctccactgccaactacatgatcactgtc
gctgaagaggagagccacggccgcagtagctacggcgtgtgcttcatcgacacgtcgctc
ggccagttccgcctcggccagttctccgacgacaaacactcgtcgcggctgctcaccacg
ctggcgcaccacccgcccgcactggtaatatacgaccgcaagtccacctccccccgcaca
gtgaacctcctgaccacacactgccccagcgcgcggcgcgaggccctgccgctgtgggcg
ccggagaagaccctaaaggtgctagccgagaagtattataagaccaatgtggatggcgac
tggcctgatgggattagggagtttttgcatgacggtgatgccctcggcctaacaccagct
aataactgctacctagccataaaagcactagggggctgcgtttcatacttgaccgactgt
ctgctagacatacaaatactagaaatggggcagtttacttcctactcgccgccggacgtg
ctaaacaagaccttgtcgcaagagactaaggtcgaaaatcggtgggaaggaggcaacact
atggtgctagatgctataacactaaggaacctgagaatagtgcaggatgaggggtgtttg
tacgacaaattgaactactgctccacgccgtttggaaagagactgctctaccaatgggtg
tgttccccgagcgccaacatggccgagatcagcgagcggcagggcgcagtccgggccctg
ttccacaacaacgagctcagccaggaggcgcaggccgtgctggcccccctgccggacctg
gagagactgctggccaaagtgcacgccctcggcaacctaaagcgttccaaacaccatccc
gacgcgcgcgccatattctacgaagagaagacctacaccaagcggaaagttctagacttc
atagcggtactgaacggattcacggccgtgatgaaactgctggacttgttcgagaacacg
gactcggagatgttgaacagattgaccagattgccgcctcatggcaaatttcctgattac
cgcgaggagctggcgttttttaagcaatccttcaaccacgcggaagccgagaaagaaggc
cgaatgctgcccggcgccggcatagactcggagtacgacgacagtctgcgagagatagat
agcatccaggctgaactgcaagagtatttgaaggaacaggaaaagttcttccgctgccgg
gtaacctttgtgggcacggacaagaagcgcttccaactagaagtggcgtcgggggcggcg
gcgcgcgccacgtcacactaccagctcgagggcaccaggaaggggtatagcaagttctcc
accgctgagactaaggaactcctcgcccgtatgatggcagccgaagaacagaaggccacc
gtactaaaggacttcagtcgccgtatatttgagaagttctctcaaaagtactcactatgg
gaggcggcagtgaagagagttgccgtgctggatgttctgttgagtctggcgcagttcgcg
aggcaacagagcggggacgtgtgtctgcccgaggtcacttttgaaccggatgtcaagccc
ttcatacaaatcaccgagggccggcacccgtgcatccctgtgaacgactttatccccaac
gacacagagttgggagttgaagagacgagtttaatgctgctcacgggccccaacatgggc
ggtaaatccacgctgatgcggcaagtcggtctcctaactgtgctcgcgcatttgggcagc
tacgtgccagcccagcactgccgtctatccgccgtggaccgcatcttcacccgtctcggc
gccaacgacgacatcttgtcgggacagtccacgttcctcgtcgagatgaacgagaccgcc
gccatagtggcccatgcaacggagcattctttggtgttgcttgatgaattaggtcgcggc
acctcaacatacgacggcacggccatcgcgtccggcgtctgcgcggagctggcggcacgg
cgctgtcgctgcgtgttcagcacgcactaccactcgctcgtgaggcacctcgcccgtcac
ccgcgcgtgctgctccggcacatggcctgcatggtggagacagacgagacaacggctgac
aacgaggatgagatccccgaagaaaccatcacattcctctacaagctggctcccggggcc
tgccccaagtcttacggcttcaacgccgcccgcctcgccggcatccctagggagataact
cgcagggcccaacagatatccaggaacttggagaaggaggccacgtgtgtacgcgccttt
agggatatcatgaaaatggggagtaatgcgaaggagttgagggatttgttgggtaagttg
agcatttga
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