Plutella xylostella (diamondback moth): 105384960
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Entry
105384960 CDS
T03915
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105384960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxy03041
]
105384960
Spliceosome [BR:
pxy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105384960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
PRP4
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
105384960
NCBI-ProteinID:
XP_048485769
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All DBs
Position
24:3553978..3569102
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AA seq
539 aa
AA seq
DB search
MSDDDDVVFVKKTKQVHYGSLEEQEKARLAALAAAARDGVEDTGGKDLGDIQVSSEYMDL
EDEMSKDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAIHKKLEEEEARIERERDREGTWYHEGPPALRAARRAIARYSLPRAKERLKK
AREELQQPGSARAAARQEAQRRAAAMGIYCSQIGDTRPISFCRFSDDSKMLITSSWSGLV
KVWSVPECRQLHTLRAHTCNVSAAVFRPGVQAPAHFSDKLKEDPADGATAPQDGGAMEVE
MDSSARECAMASCAYDGSVHLWNFASDQPMASLAGHSPHRVARVEFHPSGRFLATTVFDH
SWRLWDLESGKEVLHQEGHTKPVYCVAFQVDGSLAITGSMDAFGRVWDLRTGRCVMLLAG
HGGAVLGAAGAPGGSLVATAAADHTARVWDLRARRCVYTLPAHTSTVTDIRYQRSHGHFL
LTASYDQSAKLWSSPAHHPLRTLSGHDNKVMSADISFDNKYIATSSYDRTFKLWAPDLA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgacgatgatgtcgtatttgtgaagaagacgaagcaggtgcactatgggtct
ctcgaggagcaagagaaggctcggctggcggcgctggcggccgcggcccgggacggcgtc
gaggacaccggcgggaaagaccttggggatattcaggtgtcgtcagagtacatggacctt
gaggatgagatgtccaaggataaaaaggctctcttggaggagtttgagcgcagacgcaag
gcgcggcagctgaatgtgtccactgatgatgatgaggtgcggaggagtctgcgtcagctt
ggagagcccgtgtgcctgttcggagagggccctgcggagagacgtgtcaggcttcgtgac
ctgctcagctaccttggtgaagacgcgatccacaagaagctcgaagaggaggaggctcgc
atcgagcgcgagcgggaccgcgagggcacgtggtaccacgaggggccgccggcgctgcgg
gccgcgcgcagagccatcgcgcggtactcgctgcccagagccaaggagcggctcaagaag
gctcgcgaggagctgcagcagccgggcagcgcgcgcgccgcggcacggcaggaggcgcag
aggcgcgccgcagccatgggcatctactgcagtcagatcggcgacactcgtcctataagt
ttctgcagattcagtgacgacagcaaaatgctcatcacatccagctggtcaggcctcgtc
aaggtgtggtcggtgcccgagtgccggcagctgcacacgctgcgcgcgcacacgtgcaac
gtgagcgccgccgtgttccgccccggcgtgcaggcgccagcgcactttagtgataagctt
aaagaagacccagcagatggcgccacagccccacaagatggcggcgccatggaggtggag
atggacagctccgcgcgcgagtgcgccatggcgtcctgcgcgtacgacggctccgtgcat
ctgtggaacttcgccagtgaccagcccatggcctccctcgccggccacagcccgcatcgc
gtggcgcgcgtcgagttccacccgtcgggccgcttcttagccaccaccgtgttcgaccac
tcgtggcgcctgtgggacctggagtctggtaaagaagttctccatcaagagggtcacaca
aagcccgtgtactgcgtcgcgttccaagtggacggatctctggctatcaccgggagcatg
gacgcgttcgggcgagtctgggacctgcgcacggggcgctgcgtgatgctcctcgcgggg
cacgggggcgcagttctgggggcggcgggggcgccggggggctccctggtagccaccgcc
gccgccgaccacacggcgcgcgtgtgggacctgcgcgcgcgccgctgcgtctacacgctg
ccggcgcacactagcactgtcacagacatccgctaccagcgcagccacgggcacttcctg
ctgacggcgtcgtacgaccagagcgccaagctgtggtccagcccggcccaccacccgctc
cggacgctctccggacatgataataaggtgatgagtgcagacatatcgttcgacaacaag
tacatagcgaccagctcgtacgaccgcacgttcaagctgtgggcgcccgacctagcgtag
DBGET
integrated database retrieval system
