Plutella xylostella (diamondback moth): 105385143
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Entry
105385143 CDS
T03915
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03030
DNA replication
pxy03410
Base excision repair
pxy03420
Nucleotide excision repair
pxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105385143
03410 Base excision repair
105385143
03420 Nucleotide excision repair
105385143
03430 Mismatch repair
105385143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxy03032
]
105385143
03400 DNA repair and recombination proteins [BR:
pxy03400
]
105385143
DNA replication proteins [BR:
pxy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105385143
DNA repair and recombination proteins [BR:
pxy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105385143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_5
AAA_14
AAA_17
BRCT_2
AAA_33
AAA_16
RuvB_N
NTPase_1
AAA_18
RNA_helicase
RCF1-5-like_lid
AAA_19
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
105385143
NCBI-ProteinID:
XP_037964493
LinkDB
All DBs
Position
15:complement(6458077..6475002)
Genome browser
AA seq
1172 aa
AA seq
DB search
MPKKKPCQTATPQQDIRSFFKQKSAPKEKPITKVDLSDDDVIPESPDVHIATKKKQARKR
QVVDDSSDEEIFTSKKKKSSNDKKDKTEISNSKTSEKAPLKEVKPSDLFGKGPIKRTEPI
VKKEKKDLKTEIGIHNDEDFEKSLLEIDNIESEALNGIQDAKKCETKTNNVKSNGDVTKV
DEITKPNKSSEKISDNSHTEKQLKDKSSNGRSNSDTDKNKKKKDHTSGKKSNEEKSTLSD
NPILKKERNNVLTSPEELRKVNNEKSKGPTDNKKEPDNNTLANKESESKEDVNPPKPEKY
KIPKKPSTESTKHNDTKEENKNSSKKKQDDKVSKMAKSKRAFSEFVGEDEGTQNHDTDHS
EEAPKSKKNKLNSTLNNSVVSDEERYEKKRHSAILYQNYLNRTGPKNPGSKEIPEGAANC
LKDCAFLLTGVLESFERDEIAEAITKYGGTVKSGVSRKVTHVLAGEEAGPAKIAKAEELG
IRIINEDEFLKLIVDLSNKDAPKKVEKGKHEKMNKKDKTSPDDDKKTESSKKRTKASEEA
LKNFEEKVKKNFYPKAKETIKIESSPEKEMEPSTSKSSQTKHKIDEVKRTDSNISSSSSV
ADMKSEHSSSSIAGNSQMWVEKYKPQNIKQIIGQHGDASNVKKLMNWLTRWYVNRKEKLS
KPSPWAKNDDGAFYKAALLSGPPGVGKTTTVSLVCKELGFDAVEFNASDTRNKTLIKGQI
GELLTTNSLSGYARGDTGKQAVSKKHVLVMDEVDGMAGNEDRGGLQELISLIKTTAVPII
CMCNDRNSEKMRTLVNYCYDLKFQRPRVPQIMSAMLSVCCKEGIKIPTEALTQLIVASNQ
DVRQTLNSLSMWAIDPALLDADGLKKDAQNKKKDLKMGPWEAIRKVFSAEDHKSMSIHDK
SDLFFADYSLAPLFVQENYLHVQPHCPKHEVLERLSQAADSISLGDTVEARIRGQQAWSL
LPLQAMYSSVIPGAALSGHVAAQVQFPAWLGKNSRHNKMKRLAHEIHAHTRLSATASKSS
IFLDYARALRDSIVTPLVQDKAEGIPAAIDLLTSYHLTREDLDSLAELATWPGQRDPMVL
VDSKVKAAMTRAYNKQAPALPHAAPSFSKSKRDRDADSQYTETEDDVEAEEDSEPENDAM
IKVKKKTAPKSKESEKPSTSKGDKGKKGKGKK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagaaaccttgtcaaactgcaactccgcagcaggatatcagatcatttttc
aaacaaaagtctgcaccaaaagagaagcctattactaaagtagatttgagtgatgatgat
gtgataccagagtctccagatgttcacattgcaactaagaaaaagcaagcaaggaaaaga
caagttgtggatgactcttctgatgaagaaatatttactagtaaaaaaaagaaaagttca
aatgataagaaagataaaactgaaatttcaaatagcaaaacatcagaaaaagctccactg
aaagaagtgaaaccttcagatttgtttggcaaaggacctatcaaaagaacagaacctata
gtcaaaaaggaaaaaaaggatctgaaaactgaaattggtattcataatgatgaagatttt
gagaaaagccttttagaaattgataacattgaaagtgaagcgttgaatggtatacaagat
gccaaaaaatgtgaaacaaaaacaaataatgttaaatctaatggagatgtaacaaaagtt
gatgaaattactaaacctaataagtcctctgaaaagatctctgacaattctcatacagaa
aaacaattgaaagataaatcttcaaatggtcgcagtaattcagatactgacaaaaacaaa
aaaaagaaagaccatacatctggaaaaaaatcgaatgaagagaaatcaactctgtcagat
aatccaattcttaaaaaagaaaggaataatgtactcacatctcctgaagaactaagaaaa
gtaaataatgaaaaaagtaaaggaccaactgataataaaaaagaacctgataataacacg
ttagcaaacaaagaaagtgaatctaaagaagatgtcaatccacctaaaccagaaaagtat
aaaattcccaagaaaccttcaacagaatcaactaaacataatgatacaaaagaagaaaac
aaaaacagttccaagaaaaagcaagatgataaagtgtctaaaatggcgaaaagcaaaagg
gctttttctgagtttgttggtgaagatgaaggcacccaaaatcatgacactgaccacagt
gaggaagcacccaagagtaaaaagaataaacttaactctacattaaataattcagttgtc
tctgatgaagaaaggtatgagaagaaaagacattcagcaatcctttatcaaaactacctt
aacaggacaggtccaaagaacccaggatctaaagagataccagagggagctgcaaattgt
ctaaaagactgcgcgtttctgctcactggagtgttggaatcgtttgaaagggatgaaatt
gctgaggctataaccaaatatggcggcactgttaaaagtggagtcagtagaaaggtaacc
catgtcttagcaggcgaagaggctggtcccgcgaagattgccaaggcagaggaactagga
atcagaattattaacgaggatgaattcctcaagcttattgtagacctttcaaacaaagat
gctcccaaaaaagttgaaaaaggcaagcatgaaaagatgaataaaaaagataaaacttct
cctgatgacgataaaaaaactgaatcctctaagaagagaacaaaggcatcggaagaagct
ttgaagaactttgaagaaaaagttaagaagaacttttatcctaaagccaaagaaaccatt
aagattgagtcgtcacccgaaaaagaaatggaacctagtacttctaaatcatctcaaact
aagcataaaatagatgaggtgaaaaggactgacagtaacatcagcagtagcagcagtgta
gcagacatgaagtcggagcattcttcttcttcgatcgcgggcaactcgcagatgtgggtg
gagaaatacaagccacagaacatcaagcagatcatcggacagcacggagacgctagcaat
gttaaaaagttgatgaactggctgacccggtggtacgtgaaccgcaaggagaagctgtca
aagccgagcccgtgggccaagaacgacgacggcgcgttctacaaggccgcgctgctgtcc
ggaccgcccggtgtcggtaagaccacaacagtgtcgctagtgtgcaaggagctcggcttc
gacgcggtggagttcaacgcgtcggacacgcgcaacaagacgctcatcaagggacagatc
ggcgagctgctcactaccaactcgctgtccgggtatgctagaggcgacacgggcaagcaa
gctgtgagcaagaaacacgttttagttatggatgaagtagacggcatggcggggaatgaa
gacagaggtggtctccaagagctgatatcactgatcaagacgacggcggtgccgatcatc
tgcatgtgcaacgacaggaacagcgagaagatgcgcacgctggtgaactactgctacgac
ctcaagttccagaggccgcgggtgccgcagatcatgtccgcgatgctctccgtatgctgc
aaggaaggcatcaagatccccaccgaagccctgacccagctgatagtggcgtccaaccag
gacgtgcgacagacgctcaactcgctctccatgtgggccatcgaccccgcgctgctggat
gctgatgggctgaagaaagacgcgcagaataagaagaaggacttgaaaatgggtccatgg
gaggccatccgcaaagtgttctcagcggaagaccacaagagcatgtccatacacgacaag
agcgacctgttcttcgcggactacagcctggcgccgctgttcgtgcaggagaactatctg
cacgtgcagccgcactgccccaaacacgaagtgctggagcggctgagccaggcggcggac
agcatcagcctcggggacacggtggaggcgcgcatccgcggccaacaggcctggagcctg
ctgccgctacaggcgatgtacagttcagtgatcccgggcgcggcgctgtccgggcacgtg
gccgcacaggttcagttcccggcctggctcggcaaaaactcacgacacaacaagatgaag
agactcgcgcatgagatacacgcgcacaccagactcagtgcaacagcgtccaaatcctca
atcttcctcgactacgcgcgggcgctccgagactccatcgtgaccccgctggtacaagac
aaggcggagggcatcccggcggccatcgacctgctcacctcctaccacctcacccgcgag
gacctggactcgctggccgagctggccacgtggcccggccagagggaccctatggtgctc
gtggattctaaggtgaaagccgccatgacgcgcgcctacaacaagcaagcgccggcgctg
ccgcacgccgcgccctccttctccaagagcaagcgagacagagacgccgatagccagtac
accgagacggaagatgacgtcgaggcagaagaggacagcgagccagagaacgacgctatg
atcaaggtcaaaaaaaagacggcaccgaaatcaaaagaatcagagaaacccagcaccagt
aaaggagacaaagggaagaaaggaaagggaaaaaagtga
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