Plutella xylostella (diamondback moth): 105385411
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Entry
105385411 CDS
T03915
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03013
Nucleocytoplasmic transport
pxy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105385411
03015 mRNA surveillance pathway
105385411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105385411
Enzymes [BR:
pxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105385411
5.6.2.5 RNA 5'-3' helicase
105385411
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105385411
mRNA cycle factors
Common to processing body (P body) and stress granule
105385411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
DEAD
ATPase
UvrD-helicase
Helicase_RecD
AAA_16
NPHP3_N
AAA_22
SRP54
nSTAND3
AAA_5
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
105385411
NCBI-ProteinID:
XP_048484441
LinkDB
All DBs
Position
21:8730167..8741342
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AA seq
1036 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSTINQ
VNGVGRLDLTAKLSSTTNAIAELQFEEEDEALYSNKELPEHACKYCGIHDPATVVMCNIC
NKWFCNGRGNTSGSHIINHLVRAKHKEAALHRDGPLGETLLECYSCGARNVFVLGFIPAK
ADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLISDRAFLSWLVKVPSEAEQMRARQVTPQ
QIGRLEELWRDNVDATFQDLERPGVDEEPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL
KESQTQEGIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGELHKAWSGVGHV
IKVPDNFGDDVGLELKSGAGAPQDATTNYVVDFIWKSTSFDRMQLALRKFAVDDSSVSGY
IYRRLLGHEVDDLLFRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTV
TSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLA
LHEQARALGSADSELRKLTRLKEEAGELSAADERRYRALRRAAERRLLDAADVVCTTCVG
AGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAG
LSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPW
PRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQ
RSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRL
NVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPLSNLKESGIQFAKPKKL
VNAQNPGSHFMSTSMFDAREAMVPGSVYDRARPLRDPLAYVGPERAALLHAPVPPAAFPM
MNRLARPLTQRGTKKRPPRLSQEPLSQQPPLSLSQGASQPDFSQESAAPDCPSQPDGLLS
QDSTYQGGFRNRCSQY
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgacgcttacggaccgagctcccaaaccctcacgtttcttgatactgaagaa
gctgatcttatcggagctgatacccagggctcggagtttgagtttaccgacttcacactc
ccgtcccagagccaaacacaggcctcgcagcacgaccatggcctgtcgaccatcaaccag
gtgaacggggtggggcgtctggacctgacggcgaagttgtcgagcaccaccaatgccata
gcggagttgcagttcgaggaggaagatgaggctctgtacagcaacaaggagctgccggag
cacgcgtgcaagtactgcggcatccacgaccccgccaccgtcgtcatgtgcaacatctgt
aacaagtggttctgcaacggccgcgggaacacctcaggctcgcacatcatcaaccacctg
gtccgtgctaagcacaaggaggcggccctgcaccgcgacggcccactcggggagacccta
ctggagtgctactcgtgcggggcccggaacgtgtttgtgctgggattcatacccgctaag
gctgactccgttgttgttctgctgtgccgtcaaccttgtgctgcacagagttcactgaag
gacatgaactgggatcaggaacaatggaagcctttgatatccgatcgtgctttcctgtcc
tggttggtgaaggtgccatcggaagctgagcaaatgagggctcgtcaagtgaccccgcaa
cagatcgggcggctcgaggagctgtggcgcgacaacgtggacgccacgttccaggacctg
gagcgccccggcgtggacgaggagccgcaccaggtgctgctcagatacgaggacggctac
caataccagaacatcttcggtccccttgtcaagttagaagcggactatgacaagcgtctc
aaggagtcccagacccaagagggtattgaagtgcgctgggacgttggcctgaacaagaag
accatcgcgtactttacgttagccaagactgacggggatatgaagctcatgcatggggac
gagcttagactcagatacgtaggcgagctccacaaggcgtggtcgggcgtgggccacgtg
atcaaggtgccggacaacttcggcgacgacgtggggctcgagctgaagagcggggccggc
gcgccgcaggacgccaccaccaactatgtggtcgactttatatggaagagcaccagtttt
gaccggatgcaactagcgctccgcaagttcgccgtggacgactcctccgtatccggctac
atctaccggcggctgctcggccacgaggtcgacgacctgctgttccgcgtgcacctgccc
aagcacttcagtgcgcccaacctgcccgacctcaacagatcccaggtgtacgcagtaaaa
cacgctctgcagcgccccctgtcgctcatccagggcccgcccggcaccggcaagaccgtc
acctccgccaccatcgtctaccaactagtccggcagaacgggggcccggtcctcgtctgt
gcaccctccaacaccgctgtcgaccaactgactgagaagattcatagaactgggctgaag
gtagtcagactctgtgcaaagtccagggaagccatggagtcttcggtgtctttcttggcg
cttcacgaacaagccagggcgttaggatcagctgatagtgagctgagaaagctgacgcga
ctgaaggaagaggcgggggagctgtcagcggctgacgaacgaagatacagggcgttaaga
cgagcggcagaaagaaggttgttggatgcggcagatgtggtctgcactacgtgtgtggga
gctggtgacccgagagtggccaggatgaggttccagtcgatcctgatcgacgaaggcatg
cagtcgacggaacccgagtgtatggtgcccgtagtgctcggcgctagacagctgatatta
gtcggagatcattgccagttgggacccgtcgttatgtgcaagaaggctgccaaagctggg
ctgagccagagtctgtttgagagattggtggtgctgggaatcaggccgttccgtcttgaa
gttcaataccgaatgcatccggagctatctcgcttcccgtctgacttcttctacgaagga
tccctgcagaatggagtcagtgcagaggagaggcgtctgcacaaaatcgacttcccctgg
ccgaggcccgatcgtccgatgttcttctacgtcacgcaaggacaggaggaaatagccggg
tccggaacgtcttacctgaacaggactgaagcggccaatgtcgagaagctaacgacgaga
ttcttgaaagctggagtgaggcccgaacagattggcatcatcactccgtatgaaggccaa
aggtcttatttggtacagcacatgcaataccagggaagtcttcacgcgaagttgtaccaa
gagatagaagtggcgagtgtggacgcgttccaaggcagagagaaagacatcattataatg
tcgtgcgtgcgttctaacgaacaccagggcatagggttcttgagtgacccgcgtcggctg
aacgtcgctttgactcgcgcaaaatacgggcttattgtcgttggcaaccctaaggtactc
agcaagcagcctctatggaaccatctgttagctttctataaagaacgccgtgtgttaacc
gaaggcccgctgtctaacctcaaagagtctggtatacagttcgcgaagccgaagaaatta
gtcaacgcccagaacccgggctcccacttcatgtcgacttcaatgttcgacgctcgcgag
gcgatggtcccgggttcggtgtacgaccgcgccagacctttacgagacccgttggcttac
gtcgggcccgaacgagctgcgttgttacacgcacccgtccctccagccgccttcccgatg
atgaaccgattagcccgcccgctcacccagcgaggaaccaagaagcgacctcccaggcta
tcccaagagccgctatcccaacagccgccattatcgctgtctcagggagcttcacagccg
gacttcagccaggagtcggcggcaccggactgcccctcgcagccggacggactgctctcc
caggactctacctaccagggcgggttccgtaacagatgcagccagtactga
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