Plutella xylostella (diamondback moth): 105387316
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Entry
105387316 CDS
T03915
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105387316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pxy03041
]
105387316
Enzymes [BR:
pxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105387316
Spliceosome [BR:
pxy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105387316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
nSTAND_NTPase5
T2SSE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105387316
NCBI-ProteinID:
XP_011556326
UniProt:
A0A8S4DHG2
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Position
4:complement(5797038..5800673)
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AA seq
887 aa
AA seq
DB search
MDKSSKRRYSSSDSDSAEEGRKKDLQERDEFAKRLRKRDEEKVKKLADASKRSYEEAAKR
MKLEAEDREKILPKLRVQSRRKYLEKRKDDKVIELEADIADDEYLFDESILTARERKERE
HKKNLLQLAKEHEKARELENVHRYHMPQDLGKGQKGEYIEVDDNEKMPNSEQRKWEQEQI
KSAFFKFGAKDAKAQDEYELLLDEQIDFIQALQLEGNKEKVKEEDKEKSEYQKLRMTIEE
TKKSLPVFPFRDSLIEAIKNYQILIVEGETGSGKTTQIPQYLHEAGFTDDGKKIGCTQPR
RVAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSDRTVIKYMTDGTLHREFLSEPDLASY
SVMIIDEAHERTLHTDILFGLVKDITRFRPDLKLLISSATLDAEKFSTFFDEAPIFRIPG
RRFPVDIYYTKAPEADYVDACVVSVLQIHATQPLGDILVFLTGQEEIETCVEMLQERTKR
LGKKVKELMILPVYANLPSDMQAKIFEPTPEGARKVVLATNIAETSLTIDNIIYVIDPGF
AKQNNFNSKTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKYELEDNTVPE
IQRINLGNAVLTLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKAGRR
MAEFPTDPMLAKMLLASEKYKCSEEVVTIAAMLSVNSSVFYRPKDKIIHADTARKNFFHP
TGDHLTLMNVYNQWVDSDFSIQWCYENFIQHRSMKRARDVREQLVSLMDRVEIEMVSGIA
DDSSIRKAITAGYFYHIAKFSKGGHYKTVKHNQTVMIHPNSALFEELPRWVIYHELVFTS
KEFMRQVTEIESKWLLEVAPHYYKSKELEDSTNKKMPKTIGKSTGSK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcaagcaagagaagatattcatcgtctgactctgatagtgctgaagaaggt
agaaagaaggatctccaagaacgagatgaattcgctaaaagattacgaaaacgagacgaa
gagaaggttaagaaactggccgatgcatcaaaacggtcgtacgaagaagccgctaagcgt
atgaagcttgaagcagaagacagggaaaaaatattacctaaacttcgtgttcaatctcgc
cgcaaatatttagagaaaagaaaggatgataaagtcatagaattggaagctgatatcgcg
gacgacgagtacctcttcgatgagagcatacttactgctcgtgagaggaaggaaagagag
cacaagaaaaatcttcttcaattagctaaagaacatgaaaaggcaagagagttggaaaat
gtccacaggtatcatatgcctcaagacctgggaaaaggacagaaaggagaatacattgaa
gtggatgacaatgagaagatgccgaactctgaacagcggaaatgggagcaggaacagatc
aagtcagcattctttaaatttggagcaaaagatgcaaaagcccaagatgaatatgaatta
ctattggatgaacagattgattttattcaggctcttcaacttgaaggcaacaaagaaaaa
gtaaaagaagaagataaagaaaaatctgagtatcagaagctccggatgaccatagaggaa
accaagaagtcccttcctgtttttcccttcagagattccttgatagaagccattaaaaat
tatcaaatcttgatagttgaaggagagactgggtcaggtaaaactactcaaataccacag
tatctacatgaagctggatttacagatgatggtaaaaaaattggatgcacccaaccaagg
agagttgctgcaatgtctgtagctgccagagtcgctcaggaaatgaatgtgaagcttggg
aatgaagtgggatacagtatccgctttgaagactgcacttctgaccgaactgtcataaag
tacatgacagatggtactctacacagagagttcttgtcggagcctgatctagcttcctac
agtgtcatgatcattgatgaagctcatgagaggaccctgcacactgacatattatttggt
ctagtaaaagacatcactagattcagacctgacttaaagctcttaatttccagtgctact
ctagatgctgaaaaattttctaccttttttgatgaagcaccaatatttagaatacctgga
agaaggtttccagttgacatttattacacaaaggctccagaggcagactatgtggatgct
tgtgtagtgtcagtgctacagatacatgccactcagccactcggggacattcttgtgttc
cttactggtcaggaagagattgagacttgcgtagagatgttgcaggagaggactaaaaga
ttgggaaagaaggtaaaggaactaatgatcctacctgtctatgctaatctacccagtgat
atgcaagctaaaatatttgagccaactcctgaaggagccagaaaagttgtattagccacc
aatattgctgaaacatccttgactattgacaatataatttatgtaattgatcctggtttt
gccaagcaaaacaactttaattccaaaacaggcatggagagtttgatggttgtccccata
tcaaaagcctcagctaatcaaagggctggcagagctggcagagtagcccctgggaagtgc
ttccggctttacacagcatgggcttacaagtatgagcttgaagacaatacagtgcctgag
atacagagaataaacttgggcaatgctgtactcacactgaaggcgctggggatcaatgac
cttatacactttgactttttagaccctcctcctcacgagacgttagtcttagctctagag
cagctgtatgccctgggggccctcaaccaccatggtgagttgacaaaggctggaagaaga
atggctgaatttcccactgaccctatgttagctaaaatgttattagctagtgaaaagtac
aagtgctctgaagaagtggtgaccattgctgcaatgctttcagtaaacagttcagttttc
tacagaccgaaagacaaaataattcatgccgacacagcaaggaagaatttcttccatccc
actggtgatcatttgaccttgatgaatgtttataatcaatgggtcgattcagatttttcc
atacaatggtgttatgaaaatttcatacagcacagatcaatgaagagagccagagatgtg
cgagaacaattggtcagcctcatggatcgagttgaaatagaaatggtgtctggtattgca
gatgactccagcatacgaaaagcaatcacagcgggatatttctaccacattgctaagttt
tctaaaggtggtcattacaaaacagtcaaacacaaccaaactgttatgattcatccaaac
agtgcattgtttgaagaattgccaaggtgggtcatttaccatgagctggttttcacatct
aaggaattcatgagacaggttacagaaattgaaagtaagtggcttcttgaagtggctcca
cattattacaaatccaaagaattagaagattctactaataaaaagatgcctaaaacaatt
ggtaaatcaacaggaagtaaataa
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