Plutella xylostella (diamondback moth): 105387358
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Entry
105387358 CDS
T03915
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105387358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105387358
Enzymes [BR:
pxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
105387358
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105387358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
AAA_21
MMR_HSR1
AAA_10
AAA_16
ATP_bind_1
RsgA_GTPase
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
105387358
NCBI-ProteinID:
XP_048486316
LinkDB
All DBs
Position
25:1403700..1409145
Genome browser
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLDPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKAYEFHTGAKVAV
FTWHGCTVELRGRTEVSYVAKETPMVIYLNVHAALEQQRVAAEQEGTRGPVTMVVGPGDV
GKSTLVRILLNYAVRMGRRPIYVDLDVGQGSISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHKSPNDNLQLYNTIVSRLAEVITERIDSNKKASTSGVIINTCGWVKGPGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERTGGQRAEGRDARVREYF
YGKRTPYYPHSFDVKFSDLNIYKVGAPSLPDSCMPLGMRASDALTRLVAVSPSPALAHRL
LAVSFAAGPEDHVLHSNLAGFLCVTAVDMERQTMTVLSPQPRPLPNTVLLLSEMQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagttcagctacaagagttcaaactcgatcccgactccgaactcagatttgaa
gtcgaatctaagaacgagaaagtggttttagaggttaagagtggttacgcggagctattc
ggcacggagctggtgaagggcaaggcgtatgagttccacacgggcgccaaggtggcggtg
ttcacgtggcacggctgcaccgtggagctgcgcggccgcaccgaggtcagctacgtggcc
aaagagacacctatggtaatatacctgaatgtccacgcggcgctggagcagcagcgggtg
gcggcggagcaggagggcacgcgcgggccggtcaccatggtggtcgggcctggcgacgtt
ggcaagtccacgctcgtgcggatactcctcaactatgctgtgaggatgggaaggaggcct
atatatgtggacttggatgttggacaagggtctattagtgttcctgggactattggtgcc
ctcttggtggaacgtccagcatcaatagaggagggcttcagccagcaggcgccgctggtg
taccacttcggacacaagtctcccaatgacaacctgcaactctacaacaccatcgtgtcc
aggctcgccgaggtcattacagagaggattgactctaataagaaagcgtcaacatcggga
gtgatcatcaacacgtgcggctgggtgaaggggcccgggtacaaggtgttgacacacgca
gcacaggccttcgaggtggacgtgattctagttctagacaacgaaagattgtacaacgaa
ttgaagcgagacatgcccaagtttgtcaaagtggtctacttaccaaagagtggtggggtg
gtggagcgcacgggcgggcagcgcgcggagggccgcgacgcccgcgtccgagagtacttc
tacggcaagcgcacgccctactacccgcactcgtttgatgtcaagttcagcgatctcaat
atttataaggtgggcgcgccgtcgctccccgactcgtgcatgccgctcgggatgcgcgcg
tcggacgcgctgacgcggctggtggccgtgtcgccgtcgcccgcgctcgcgcaccggctg
ctggccgtgtcgttcgccgccggcccggaggaccatgtgctgcactcgaacttagccggg
ttcctttgtgtcacggcggtggacatggagcggcagaccatgaccgtgctgtccccgcag
ccgcggccgctgcccaacactgtacttctactgtcagagatgcagtacatggacaaccac
tag
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integrated database retrieval system
