Plutella xylostella (diamondback moth): 105387862
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Entry
105387862 CDS
T03915
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105387862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105387862
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105387862
mRNA degradation factors
5'-3' decay
Decapping complex
105387862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
105387862
NCBI-ProteinID:
XP_048487942
LinkDB
All DBs
Position
30:4973461..5011932
Genome browser
AA seq
934 aa
AA seq
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MSDSFFGFDTSLSNLNDDDGGGGDGSEDEYDALNDETFGQEGDELDWEAQHELVASQLES
SRRRADAMDDTHSQLEASLSQLVLDEPDCPRSLGSSVWRPVPAAPYAPPPNPVTLKNVCT
VEELERQLRQKQAPPQHNYYQPRFPPVILQRPPGLQAPVPLPYAPQQPISHPMSNMMNQN
NHQMGQMGNQMGQMGQMGNQMGQMGNHNLTQNVNQFMQNSGFQNNQMMQNMNQMGQGMNQ
PMSQGHNPQNQMVPNGNQYPGGQYLGPPGPRLMAPPPGLNMPRQPYSPSQGFNHNFRGPS
KPEQPPVNQPNLMMNQQMMQQQNMQQNMQQNMQQNMPQMQNQSPHMNQMNQSPQLIQNMK
QQQQQQQQKLQQKQRTPYNNQKNSNTMTSENLVQYIQNTHPMLQMTQSSSFHNARQHPLL
NQRGFASQPAPPSHRQQHHVQNNRQLMNGDVSPDDSDCSDPYAGLMTSREKQWLINIQML
QLCTGTPYIHDFYYTVFLERQSRKDKEGIKEAHKANQQNHPFYSGGVKQETHRERHNSNR
HNSTSEDGVAPRTYVPTQFENSLGKLQCGSVTAPRKMLDVELVAGEAPPAPPRAPSRAST
AHHDVPREVRRTKQLLLDIEALYLILLRLEEMNDPLAISNALILKEREEKQKQMEQAVKE
AIEKEARAESLNLFLRNIESVQRRPKTDSPKPDLLDKRQVVNLTPLATNPTLTAKNLLDE
NKEELVNKMFAGLLHEDRLQQIIMVRKGKVLISRFLCLPSSHNAMYRATWRGVLRALPAV
ARRATHLTLLHALHAPHAKYIQNSTGWAAVLEACAMLSEAVDPARTPHALTCSFTLSAVC
TLIEKASTLVNTPEATSNERQWTKFLKTFARALKNTTLTVARPAKPLSEAKLLYHLKQIE
SRSTIEILQRGKTAAEFADLSKAEMAELLVKHLC
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcttttttcgggttcgatacttcgttatcgaacttaaacgatgatgacggt
ggtggcggagatggctctgaggacgagtatgatgccctcaatgatgagacattcgggcag
gagggagacgagctggactgggaggcgcagcacgagctggtggcctcgcagctggagagc
agccgccgtcgagcggatgctatggacgacacacactcacaacttgaggcctctctatcc
cagctagtactggacgagccggactgcccgcgcagcctcggcagcagcgtgtggcgtccc
gtgcccgccgcgccctacgcgccgccgcctaatccggtgaccctcaagaatgtgtgcacg
gtggaggagctggagcgccagctgcggcagaagcaggcgccgccgcagcacaactactac
cagccccgattccctccggtgatactacagcggcccccgggcctccaggcgccggtgcct
ctcccctacgcgccccaacagcccatctcccaccccatgtccaacatgatgaaccagaac
aaccaccagatgggtcaaatgggcaaccagatgggtcaaatgggtcagatgggcaaccaa
atgggtcagatgggtaatcacaatttgacccagaatgtgaatcagtttatgcagaatagc
gggtttcagaacaaccagatgatgcagaatatgaatcagatgggtcaaggcatgaaccaa
cccatgtcccaaggccacaacccccaaaaccagatggtccccaacggcaaccagtacccc
gggggacagtacctgggcccgcccggcccccgccttatggcgcccccgcccgggctgaac
atgccgagacagccgtatagccctagccaggggtttaaccataactttcgtggcccctca
aaaccggagcagccaccagtgaaccaacccaacctcatgatgaatcaacagatgatgcag
cagcagaatatgcaacagaacatgcagcaaaatatgcaacaaaatatgccacaaatgcag
aaccagtcgccgcatatgaatcagatgaaccaatccccgcaactgatccagaacatgaag
caacaacaacaacaacaacagcagaagctgcagcagaaacagcgtacgccgtacaacaac
cagaagaatagcaatacgatgacttcggagaatctggtgcagtatatacagaacacgcac
ccaatgctccaaatgacccaatcttcgagcttccacaacgcgaggcaacacccgctgctg
aaccaacgcgggttcgcgtcccagccggcaccgcccagccatagacaacagcatcatgtg
cagaacaacagacaactaatgaacggcgacgtatcgcccgacgacagcgactgttccgac
ccttacgcgggcctgatgacgtcacgagagaagcagtggctcatcaacatacagatgctg
cagctgtgcacggggacgccgtatatacacgacttttactatacggtattcttagaaaga
caatccaggaaggacaaagagggaatcaaggaagctcataaggcgaatcaacagaaccac
cccttctacagcggaggtgtaaaacaagagacgcaccgcgagaggcacaactccaaccgg
cacaactccacgagtgaagacggcgtggcgccgcggacctatgtgcccacgcagtttgag
aattcactggggaaattacagtgcggcagtgtgacggctccccgcaagatgctggacgtg
gagctggtggcgggcgaggcgccccccgcgcccccccgcgccccgagccgcgccagcacc
gcgcaccatgacgtgccgcgagaagtgcgtagaacgaagcagctgctgctagacatcgag
gcgctgtacctgatcctgctgcggctcgaggagatgaacgacccgctcgccatctccaat
gcgctcatattgaaggagcgagaagagaaacagaaacaaatggagcaggcggtcaaggag
gccatcgagaaggaggcgcgggcggagtcgctgaacctgttcctcaggaacatcgagtcg
gtgcagcggaggcccaagacggacagccccaagcccgacctgttggataagagacaggtg
gtgaatctgacgccgctagcgacaaacccgacgctcactgccaagaaccttctagacgag
aataaagaagaactcgtgaacaagatgtttgctgggttgttacatgaagacagacttcag
cagatcatcatggtccggaagggaaaggtgctaatatcccgcttcctgtgcctcccgtcg
tcgcacaacgccatgtaccgcgcgacgtggcgcggcgtgctgcgcgcgctgcccgccgtg
gcgcgccgcgcgacgcacctcacgttgctgcatgcgttacacgcgcctcatgctaaatac
atccagaacagcacgggctgggcggcagtgctagaagcgtgcgccatgttgtccgaggcc
gtcgaccctgcgcggacgccgcacgctctcacgtgctccttcactctaagcgcggtgtgc
acactcatcgagaaagcctcaacgctcgtcaatacgccagaagcgacatctaacgagcgt
cagtggaccaaattcctcaaaaccttcgcgagagcgctcaaaaacaccaccctgaccgta
gccagacccgccaaacccttatccgaagccaaactactgtatcatttaaaacagatagaa
tctagaagcactatagagatcctacaacgcggtaagacggctgcggaattcgcagatctg
tccaaagctgaaatggcagagctgttggttaaacacctctgttga
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